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FAM126B (family with sequence similarity 126 member B)

Identity

Alias_namesfamily with sequence similarity 126, member B
Alias_symbol (synonym)MGC39518
HYCC2
Other alias
HGNC (Hugo) FAM126B
LocusID (NCBI) 285172
Atlas_Id 63011
Location 2q33.1  [Link to chromosome band 2q33]
Location_base_pair Starts at 200973718 and ends at 201071671 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM126B (2q33.1) / ALS2CR12 (2q33.1)FAM126B (2q33.1) / FAM126B (2q33.1)FAM126B (2q33.1) / FTL (19q13.33)
FAM126B (2q33.1) / ORC2 (2q33.1)FAM126B (2q33.1) / SLC39A10 (2q32.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM126B   28593
Cards
Entrez_Gene (NCBI)FAM126B  285172  family with sequence similarity 126 member B
AliasesHYCC2
GeneCards (Weizmann)FAM126B
Ensembl hg19 (Hinxton)ENSG00000155744 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155744 [Gene_View]  chr2:200973718-201071671 [Contig_View]  FAM126B [Vega]
ICGC DataPortalENSG00000155744
TCGA cBioPortalFAM126B
AceView (NCBI)FAM126B
Genatlas (Paris)FAM126B
WikiGenes285172
SOURCE (Princeton)FAM126B
Genetics Home Reference (NIH)FAM126B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM126B  -     chr2:200973718-201071671 -  2q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM126B  -     2q33.1   [Description]    (hg19-Feb_2009)
EnsemblFAM126B - 2q33.1 [CytoView hg19]  FAM126B - 2q33.1 [CytoView hg38]
Mapping of homologs : NCBIFAM126B [Mapview hg19]  FAM126B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001843 AK027168 AK095236 AK097111 AK124184
RefSeq transcript (Entrez)NM_001321618 NM_001321619 NM_001321621 NM_001321622 NM_001321623 NM_001321624 NM_001321625 NM_001321626 NM_001321627 NM_001321628 NM_001321629 NM_173822
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM126B
Cluster EST : UnigeneHs.24701 [ NCBI ]
CGAP (NCI)Hs.24701
Alternative Splicing GalleryENSG00000155744
Gene ExpressionFAM126B [ NCBI-GEO ]   FAM126B [ EBI - ARRAY_EXPRESS ]   FAM126B [ SEEK ]   FAM126B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM126B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285172
GTEX Portal (Tissue expression)FAM126B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IXS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IXS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IXS8
Splice isoforms : SwissVarQ8IXS8
PhosPhoSitePlusQ8IXS8
Domains : Interpro (EBI)Hyccin   
Domain families : Pfam (Sanger)Hyccin (PF09790)   
Domain families : Pfam (NCBI)pfam09790   
Conserved Domain (NCBI)FAM126B
DMDM Disease mutations285172
Blocks (Seattle)FAM126B
SuperfamilyQ8IXS8
Human Protein AtlasENSG00000155744
Peptide AtlasQ8IXS8
HPRD11345
IPIIPI00217616   IPI00977526   IPI00976339   IPI00926524   IPI00927602   IPI00924690   IPI00925834   
Protein Interaction databases
DIP (DOE-UCLA)Q8IXS8
IntAct (EBI)Q8IXS8
FunCoupENSG00000155744
BioGRIDFAM126B
STRING (EMBL)FAM126B
ZODIACFAM126B
Ontologies - Pathways
QuickGOQ8IXS8
Ontology : AmiGOprotein binding  intracellular  cytosol  plasma membrane  
Ontology : EGO-EBIprotein binding  intracellular  cytosol  plasma membrane  
NDEx NetworkFAM126B
Atlas of Cancer Signalling NetworkFAM126B
Wikipedia pathwaysFAM126B
Orthology - Evolution
OrthoDB285172
GeneTree (enSembl)ENSG00000155744
Phylogenetic Trees/Animal Genes : TreeFamFAM126B
HOVERGENQ8IXS8
HOGENOMQ8IXS8
Homologs : HomoloGeneFAM126B
Homology/Alignments : Family Browser (UCSC)FAM126B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM126B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM126B
dbVarFAM126B
ClinVarFAM126B
1000_GenomesFAM126B 
Exome Variant ServerFAM126B
ExAC (Exome Aggregation Consortium)FAM126B (select the gene name)
Genetic variants : HAPMAP285172
Genomic Variants (DGV)FAM126B [DGVbeta]
DECIPHERFAM126B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM126B 
Mutations
ICGC Data PortalFAM126B 
TCGA Data PortalFAM126B 
Broad Tumor PortalFAM126B
OASIS PortalFAM126B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM126B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM126B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM126B
DgiDB (Drug Gene Interaction Database)FAM126B
DoCM (Curated mutations)FAM126B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM126B (select a term)
intoGenFAM126B
Cancer3DFAM126B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM126B
Genetic Testing Registry FAM126B
NextProtQ8IXS8 [Medical]
TSGene285172
GENETestsFAM126B
Target ValidationFAM126B
Huge Navigator FAM126B [HugePedia]
snp3D : Map Gene to Disease285172
BioCentury BCIQFAM126B
ClinGenFAM126B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285172
Chemical/Pharm GKB GenePA162385879
Clinical trialFAM126B
Miscellaneous
canSAR (ICR)FAM126B (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM126B
EVEXFAM126B
GoPubMedFAM126B
iHOPFAM126B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:34 CEST 2017

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