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FAM127A (family with sequence similarity 127, member A)

Identity

Alias_namesCXX1
CAAX box 1
family with sequence similarity 127, member A
Alias_symbol (synonym)Mart8
Mar8
MAR8C
Other aliasMART8C
HGNC (Hugo) FAM127A
LocusID (NCBI) 8933
Atlas_Id 63012
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 134166333 and ends at 134167575 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DDX5 (17q23.3) / FAM127A (Xq26.3)FAM127A (Xq26.3) / ACADSB (10q26.13)MRPL43 (10q24.31) / FAM127A (Xq26.3)
SLC43A3 (11q12.1) / FAM127A (Xq26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM127A   2569
Cards
Entrez_Gene (NCBI)FAM127A  8933  family with sequence similarity 127, member A
AliasesCXX1; MAR8C; MART8C; Mar8; 
Mart8
GeneCards (Weizmann)FAM127A
Ensembl hg19 (Hinxton)ENSG00000134590 [Gene_View]  chrX:134166333-134167575 [Contig_View]  FAM127A [Vega]
Ensembl hg38 (Hinxton)ENSG00000134590 [Gene_View]  chrX:134166333-134167575 [Contig_View]  FAM127A [Vega]
ICGC DataPortalENSG00000134590
TCGA cBioPortalFAM127A
AceView (NCBI)FAM127A
Genatlas (Paris)FAM127A
WikiGenes8933
SOURCE (Princeton)FAM127A
Genetics Home Reference (NIH)FAM127A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM127A  -     chrX:134166333-134167575 +  Xq26.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM127A  -     Xq26.3   [Description]    (hg38-Dec_2013)
EnsemblFAM127A - Xq26.3 [CytoView hg19]  FAM127A - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBIFAM127A [Mapview hg19]  FAM127A [Mapview hg38]
OMIM300213   
Gene and transcription
Genbank (Entrez)AF038168 AF052096 BC002385 BC002410 BC106076
RefSeq transcript (Entrez)NM_001078171 NM_003928
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011786 NW_004929446
Consensus coding sequences : CCDS (NCBI)FAM127A
Cluster EST : UnigeneHs.522789 [ NCBI ]
CGAP (NCI)Hs.522789
Alternative Splicing GalleryENSG00000134590
Gene ExpressionFAM127A [ NCBI-GEO ]   FAM127A [ EBI - ARRAY_EXPRESS ]   FAM127A [ SEEK ]   FAM127A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM127A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8933
GTEX Portal (Tissue expression)FAM127A
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15255   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15255  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15255
Splice isoforms : SwissVarO15255
PhosPhoSitePlusO15255
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM127A
DMDM Disease mutations8933
Blocks (Seattle)FAM127A
SuperfamilyO15255
Human Protein AtlasENSG00000134590
Peptide AtlasO15255
HPRD02197
IPIIPI00816474   IPI00005727   
Protein Interaction databases
DIP (DOE-UCLA)O15255
IntAct (EBI)O15255
FunCoupENSG00000134590
BioGRIDFAM127A
STRING (EMBL)FAM127A
ZODIACFAM127A
Ontologies - Pathways
QuickGOO15255
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkFAM127A
Atlas of Cancer Signalling NetworkFAM127A
Wikipedia pathwaysFAM127A
Orthology - Evolution
OrthoDB8933
GeneTree (enSembl)ENSG00000134590
Phylogenetic Trees/Animal Genes : TreeFamFAM127A
HOVERGENO15255
HOGENOMO15255
Homologs : HomoloGeneFAM127A
Homology/Alignments : Family Browser (UCSC)FAM127A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM127A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM127A
dbVarFAM127A
ClinVarFAM127A
1000_GenomesFAM127A 
Exome Variant ServerFAM127A
ExAC (Exome Aggregation Consortium)FAM127A (select the gene name)
Genetic variants : HAPMAP8933
Genomic Variants (DGV)FAM127A [DGVbeta]
DECIPHER (Syndromes)X:134166333-134167575  ENSG00000134590
CONAN: Copy Number AnalysisFAM127A 
Mutations
ICGC Data PortalFAM127A 
TCGA Data PortalFAM127A 
Broad Tumor PortalFAM127A
OASIS PortalFAM127A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM127A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM127A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM127A
DgiDB (Drug Gene Interaction Database)FAM127A
DoCM (Curated mutations)FAM127A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM127A (select a term)
intoGenFAM127A
Cancer3DFAM127A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300213   
Orphanet
MedgenFAM127A
Genetic Testing Registry FAM127A
NextProtO15255 [Medical]
TSGene8933
GENETestsFAM127A
Huge Navigator FAM127A [HugePedia]
snp3D : Map Gene to Disease8933
BioCentury BCIQFAM127A
ClinGenFAM127A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8933
Chemical/Pharm GKB GenePA162385908
Clinical trialFAM127A
Miscellaneous
canSAR (ICR)FAM127A (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM127A
EVEXFAM127A
GoPubMedFAM127A
iHOPFAM127A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:29 CET 2017

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