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FAM131B (family with sequence similarity 131 member B)

Identity

Alias_namesfamily with sequence similarity 131
Alias_symbol (synonym)KIAA0773
Other alias-
HGNC (Hugo) FAM131B
LocusID (NCBI) 9715
Atlas_Id 52998
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 143050493 and ends at 143059840 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FAM131B (7q34) / BRAF (7q34)SUSD6 (14q24.1) / FAM131B (7q34)FAM131B 7q34 / BRAF 7q34

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM131B   22202
Cards
Entrez_Gene (NCBI)FAM131B  9715  family with sequence similarity 131 member B
Aliases
GeneCards (Weizmann)FAM131B
Ensembl hg19 (Hinxton)ENSG00000159784 [Gene_View]  chr7:143050493-143059840 [Contig_View]  FAM131B [Vega]
Ensembl hg38 (Hinxton)ENSG00000159784 [Gene_View]  chr7:143050493-143059840 [Contig_View]  FAM131B [Vega]
ICGC DataPortalENSG00000159784
TCGA cBioPortalFAM131B
AceView (NCBI)FAM131B
Genatlas (Paris)FAM131B
WikiGenes9715
SOURCE (Princeton)FAM131B
Genetics Home Reference (NIH)FAM131B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM131B  -     chr7:143050493-143059840 -  7q34   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM131B  -     7q34   [Description]    (hg38-Dec_2013)
EnsemblFAM131B - 7q34 [CytoView hg19]  FAM131B - 7q34 [CytoView hg38]
Mapping of homologs : NCBIFAM131B [Mapview hg19]  FAM131B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB018316 AK124557 AK291470 AL832579 BC045611
RefSeq transcript (Entrez)NM_001031690 NM_001278297 NM_014690
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)FAM131B
Cluster EST : UnigeneHs.648908 [ NCBI ]
CGAP (NCI)Hs.648908
Alternative Splicing GalleryENSG00000159784
Gene ExpressionFAM131B [ NCBI-GEO ]   FAM131B [ EBI - ARRAY_EXPRESS ]   FAM131B [ SEEK ]   FAM131B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM131B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9715
GTEX Portal (Tissue expression)FAM131B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86XD5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86XD5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86XD5
Splice isoforms : SwissVarQ86XD5
PhosPhoSitePlusQ86XD5
Domains : Interpro (EBI)FAM131   
Domain families : Pfam (Sanger)FAM131 (PF15010)   
Domain families : Pfam (NCBI)pfam15010   
Conserved Domain (NCBI)FAM131B
DMDM Disease mutations9715
Blocks (Seattle)FAM131B
SuperfamilyQ86XD5
Human Protein AtlasENSG00000159784
Peptide AtlasQ86XD5
HPRD13816
IPIIPI00641986   IPI00917945   IPI00941891   IPI00783115   IPI00917023   IPI00973760   IPI00973776   
Protein Interaction databases
DIP (DOE-UCLA)Q86XD5
IntAct (EBI)Q86XD5
FunCoupENSG00000159784
BioGRIDFAM131B
STRING (EMBL)FAM131B
ZODIACFAM131B
Ontologies - Pathways
QuickGOQ86XD5
Ontology : AmiGOpositive regulation of defense response to virus by host  protein binding  nucleoplasm  cytoplasm  mitophagy in response to mitochondrial depolarization  xenophagy  
Ontology : EGO-EBIpositive regulation of defense response to virus by host  protein binding  nucleoplasm  cytoplasm  mitophagy in response to mitochondrial depolarization  xenophagy  
NDEx NetworkFAM131B
Atlas of Cancer Signalling NetworkFAM131B
Wikipedia pathwaysFAM131B
Orthology - Evolution
OrthoDB9715
GeneTree (enSembl)ENSG00000159784
Phylogenetic Trees/Animal Genes : TreeFamFAM131B
HOVERGENQ86XD5
HOGENOMQ86XD5
Homologs : HomoloGeneFAM131B
Homology/Alignments : Family Browser (UCSC)FAM131B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM131B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM131B
dbVarFAM131B
ClinVarFAM131B
1000_GenomesFAM131B 
Exome Variant ServerFAM131B
ExAC (Exome Aggregation Consortium)FAM131B (select the gene name)
Genetic variants : HAPMAP9715
Genomic Variants (DGV)FAM131B [DGVbeta]
DECIPHER (Syndromes)7:143050493-143059840  ENSG00000159784
CONAN: Copy Number AnalysisFAM131B 
Mutations
ICGC Data PortalFAM131B 
TCGA Data PortalFAM131B 
Broad Tumor PortalFAM131B
OASIS PortalFAM131B [ Somatic mutations - Copy number]
Cancer Gene: CensusFAM131B 
Somatic Mutations in Cancer : COSMICFAM131B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM131B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM131B
DgiDB (Drug Gene Interaction Database)FAM131B
DoCM (Curated mutations)FAM131B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM131B (select a term)
intoGenFAM131B
Cancer3DFAM131B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM131B
Genetic Testing Registry FAM131B
NextProtQ86XD5 [Medical]
TSGene9715
GENETestsFAM131B
Huge Navigator FAM131B [HugePedia]
snp3D : Map Gene to Disease9715
BioCentury BCIQFAM131B
ClinGenFAM131B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9715
Chemical/Pharm GKB GenePA162386065
Clinical trialFAM131B
Miscellaneous
canSAR (ICR)FAM131B (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM131B
EVEXFAM131B
GoPubMedFAM131B
iHOPFAM131B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:00:39 CEST 2017

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