Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM132B (family with sequence similarity 132, member B)

Identity

Other aliasC1QTNF15
CTRP15
HGNC (Hugo) FAM132B
LocusID (NCBI) 151176
Atlas_Id 63018
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 239067649 and ends at 239077532 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM132B   26727
Cards
Entrez_Gene (NCBI)FAM132B  151176  family with sequence similarity 132, member B
AliasesC1QTNF15; CTRP15
GeneCards (Weizmann)FAM132B
Ensembl hg19 (Hinxton) [Gene_View]  chr2:239067649-239077532 [Contig_View]  FAM132B [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:239067649-239077532 [Contig_View]  FAM132B [Vega]
TCGA cBioPortalFAM132B
AceView (NCBI)FAM132B
Genatlas (Paris)FAM132B
WikiGenes151176
SOURCE (Princeton)FAM132B
Genetics Home Reference (NIH)FAM132B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM132B  -     chr2:239067649-239077532 +  2q37.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM132B  -     2q37.3   [Description]    (hg38-Dec_2013)
EnsemblFAM132B - 2q37.3 [CytoView hg19]  FAM132B - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBIFAM132B [Mapview hg19]  FAM132B [Mapview hg38]
OMIM615099   
Gene and transcription
Genbank (Entrez)AI362696 AK094353 BC031951 BC047423 BC063413
RefSeq transcript (Entrez)NM_001291832 NM_152521
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929306
Consensus coding sequences : CCDS (NCBI)FAM132B
Cluster EST : UnigeneHs.742300 [ NCBI ]
CGAP (NCI)Hs.742300
Gene ExpressionFAM132B [ NCBI-GEO ]   FAM132B [ EBI - ARRAY_EXPRESS ]   FAM132B [ SEEK ]   FAM132B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM132B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)151176
GTEX Portal (Tissue expression)FAM132B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4G0M1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4G0M1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4G0M1
Splice isoforms : SwissVarQ4G0M1
PhosPhoSitePlusQ4G0M1
Domaine pattern : Prosite (Expaxy)C1Q (PS50871)   
Domains : Interpro (EBI)C1q    Tumour_necrosis_fac-like_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM132B
DMDM Disease mutations151176
Blocks (Seattle)FAM132B
SuperfamilyQ4G0M1
Peptide AtlasQ4G0M1
IPIIPI00888278   IPI00937952   IPI00917747   IPI00916164   
Protein Interaction databases
DIP (DOE-UCLA)Q4G0M1
IntAct (EBI)Q4G0M1
BioGRIDFAM132B
STRING (EMBL)FAM132B
ZODIACFAM132B
Ontologies - Pathways
QuickGOQ4G0M1
Ontology : AmiGOhormone activity  extracellular region  extracellular space  cell  cell  cellular iron ion homeostasis  regulation of fatty acid metabolic process  protein homodimerization activity  positive regulation of fatty acid transport  
Ontology : EGO-EBIhormone activity  extracellular region  extracellular space  cell  cell  cellular iron ion homeostasis  regulation of fatty acid metabolic process  protein homodimerization activity  positive regulation of fatty acid transport  
NDEx NetworkFAM132B
Atlas of Cancer Signalling NetworkFAM132B
Wikipedia pathwaysFAM132B
Orthology - Evolution
OrthoDB151176
Phylogenetic Trees/Animal Genes : TreeFamFAM132B
HOVERGENQ4G0M1
HOGENOMQ4G0M1
Homologs : HomoloGeneFAM132B
Homology/Alignments : Family Browser (UCSC)FAM132B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM132B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM132B
dbVarFAM132B
ClinVarFAM132B
1000_GenomesFAM132B 
Exome Variant ServerFAM132B
ExAC (Exome Aggregation Consortium)FAM132B (select the gene name)
Genetic variants : HAPMAP151176
Genomic Variants (DGV)FAM132B [DGVbeta]
DECIPHER (Syndromes)2:239067649-239077532  
CONAN: Copy Number AnalysisFAM132B 
Mutations
ICGC Data PortalFAM132B 
TCGA Data PortalFAM132B 
Broad Tumor PortalFAM132B
OASIS PortalFAM132B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM132B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM132B
DgiDB (Drug Gene Interaction Database)FAM132B
DoCM (Curated mutations)FAM132B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM132B (select a term)
intoGenFAM132B
Cancer3DFAM132B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615099   
Orphanet
MedgenFAM132B
Genetic Testing Registry FAM132B
NextProtQ4G0M1 [Medical]
TSGene151176
GENETestsFAM132B
Huge Navigator FAM132B [HugePedia]
snp3D : Map Gene to Disease151176
BioCentury BCIQFAM132B
ClinGenFAM132B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD151176
Chemical/Pharm GKB GenePA162386102
Clinical trialFAM132B
Miscellaneous
canSAR (ICR)FAM132B (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM132B
EVEXFAM132B
GoPubMedFAM132B
iHOPFAM132B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:03:30 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.