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FAM133A (family with sequence similarity 133, member A)

Identity

Alias_namesfamily with sequence similarity 133, member A
Alias_symbol (synonym)RP1-32F7.2
FLJ37659
CT115
Other alias
HGNC (Hugo) FAM133A
LocusID (NCBI) 286499
Atlas_Id 63019
Location Xq21.32  [Link to chromosome band Xq21]
Location_base_pair Starts at 92929012 and ends at 92967273 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM133A   26748
Cards
Entrez_Gene (NCBI)FAM133A  286499  family with sequence similarity 133, member A
AliasesCT115
GeneCards (Weizmann)FAM133A
Ensembl hg19 (Hinxton)ENSG00000179083 [Gene_View]  chrX:92929012-92967273 [Contig_View]  FAM133A [Vega]
Ensembl hg38 (Hinxton)ENSG00000179083 [Gene_View]  chrX:92929012-92967273 [Contig_View]  FAM133A [Vega]
ICGC DataPortalENSG00000179083
TCGA cBioPortalFAM133A
AceView (NCBI)FAM133A
Genatlas (Paris)FAM133A
WikiGenes286499
SOURCE (Princeton)FAM133A
Genetics Home Reference (NIH)FAM133A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM133A  -     chrX:92929012-92967273 +  Xq21.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM133A  -     Xq21.32   [Description]    (hg38-Dec_2013)
EnsemblFAM133A - Xq21.32 [CytoView hg19]  FAM133A - Xq21.32 [CytoView hg38]
Mapping of homologs : NCBIFAM133A [Mapview hg19]  FAM133A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094978 BC113385 BC113387 DA188870 DA230927
RefSeq transcript (Entrez)NM_001171109 NM_001171110 NM_001171111 NM_173698
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_016400 NT_011651 NW_004929444
Consensus coding sequences : CCDS (NCBI)FAM133A
Cluster EST : UnigeneHs.110069 [ NCBI ]
CGAP (NCI)Hs.110069
Alternative Splicing GalleryENSG00000179083
Gene ExpressionFAM133A [ NCBI-GEO ]   FAM133A [ EBI - ARRAY_EXPRESS ]   FAM133A [ SEEK ]   FAM133A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM133A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286499
GTEX Portal (Tissue expression)FAM133A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N9E0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N9E0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N9E0
Splice isoforms : SwissVarQ8N9E0
PhosPhoSitePlusQ8N9E0
Domains : Interpro (EBI)Fam133   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM133A
DMDM Disease mutations286499
Blocks (Seattle)FAM133A
SuperfamilyQ8N9E0
Human Protein AtlasENSG00000179083
Peptide AtlasQ8N9E0
HPRD06562
IPIIPI00167696   
Protein Interaction databases
DIP (DOE-UCLA)Q8N9E0
IntAct (EBI)Q8N9E0
FunCoupENSG00000179083
BioGRIDFAM133A
STRING (EMBL)FAM133A
ZODIACFAM133A
Ontologies - Pathways
QuickGOQ8N9E0
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkFAM133A
Atlas of Cancer Signalling NetworkFAM133A
Wikipedia pathwaysFAM133A
Orthology - Evolution
OrthoDB286499
GeneTree (enSembl)ENSG00000179083
Phylogenetic Trees/Animal Genes : TreeFamFAM133A
HOVERGENQ8N9E0
HOGENOMQ8N9E0
Homologs : HomoloGeneFAM133A
Homology/Alignments : Family Browser (UCSC)FAM133A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM133A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM133A
dbVarFAM133A
ClinVarFAM133A
1000_GenomesFAM133A 
Exome Variant ServerFAM133A
ExAC (Exome Aggregation Consortium)FAM133A (select the gene name)
Genetic variants : HAPMAP286499
Genomic Variants (DGV)FAM133A [DGVbeta]
DECIPHER (Syndromes)X:92929012-92967273  ENSG00000179083
CONAN: Copy Number AnalysisFAM133A 
Mutations
ICGC Data PortalFAM133A 
TCGA Data PortalFAM133A 
Broad Tumor PortalFAM133A
OASIS PortalFAM133A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM133A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM133A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch FAM133A
DgiDB (Drug Gene Interaction Database)FAM133A
DoCM (Curated mutations)FAM133A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM133A (select a term)
intoGenFAM133A
Cancer3DFAM133A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM133A
Genetic Testing Registry FAM133A
NextProtQ8N9E0 [Medical]
TSGene286499
GENETestsFAM133A
Huge Navigator FAM133A [HugePedia]
snp3D : Map Gene to Disease286499
BioCentury BCIQFAM133A
ClinGenFAM133A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286499
Chemical/Pharm GKB GenePA162386125
Clinical trialFAM133A
Miscellaneous
canSAR (ICR)FAM133A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM133A
EVEXFAM133A
GoPubMedFAM133A
iHOPFAM133A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:30 CET 2017

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