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FAM134C (family with sequence similarity 134 member C)

Identity

Alias_namesfamily with sequence similarity 134
Alias_symbol (synonym)DKFZp686B1036
FLJ33806
Other alias-
HGNC (Hugo) FAM134C
LocusID (NCBI) 162427
Atlas_Id 56006
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 40731526 and ends at 40761445 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BCAM (19q13.32) / FAM134C (17q21.2)FAM134C (17q21.2) / FAM134C (17q21.2)FAM134C (17q21.2) / IDUA (4p16.3)
HIST1H2BK (6p22.1) / FAM134C (17q21.2)KCNMA1 (10q22.3) / FAM134C (17q21.2)RPL18 (19q13.33) / FAM134C (17q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM134C   27258
Cards
Entrez_Gene (NCBI)FAM134C  162427  family with sequence similarity 134 member C
Aliases
GeneCards (Weizmann)FAM134C
Ensembl hg19 (Hinxton)ENSG00000141699 [Gene_View]  chr17:40731526-40761445 [Contig_View]  FAM134C [Vega]
Ensembl hg38 (Hinxton)ENSG00000141699 [Gene_View]  chr17:40731526-40761445 [Contig_View]  FAM134C [Vega]
ICGC DataPortalENSG00000141699
TCGA cBioPortalFAM134C
AceView (NCBI)FAM134C
Genatlas (Paris)FAM134C
WikiGenes162427
SOURCE (Princeton)FAM134C
Genetics Home Reference (NIH)FAM134C
Genomic and cartography
GoldenPath hg19 (UCSC)FAM134C  -     chr17:40731526-40761445 -  17q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM134C  -     17q21.2   [Description]    (hg38-Dec_2013)
EnsemblFAM134C - 17q21.2 [CytoView hg19]  FAM134C - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIFAM134C [Mapview hg19]  FAM134C [Mapview hg38]
OMIM616498   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_178126
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM134C
Cluster EST : UnigeneHs.632262 [ NCBI ]
CGAP (NCI)Hs.632262
Alternative Splicing GalleryENSG00000141699
Gene ExpressionFAM134C [ NCBI-GEO ]   FAM134C [ EBI - ARRAY_EXPRESS ]   FAM134C [ SEEK ]   FAM134C [ MEM ]
Gene Expression Viewer (FireBrowse)FAM134C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)162427
GTEX Portal (Tissue expression)FAM134C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86VR2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86VR2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86VR2
Splice isoforms : SwissVarQ86VR2
PhosPhoSitePlusQ86VR2
Domains : Interpro (EBI)FAM134C   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM134C
DMDM Disease mutations162427
Blocks (Seattle)FAM134C
SuperfamilyQ86VR2
Human Protein AtlasENSG00000141699
Peptide AtlasQ86VR2
HPRD14108
IPIIPI00254338   IPI01014427   
Protein Interaction databases
DIP (DOE-UCLA)Q86VR2
IntAct (EBI)Q86VR2
FunCoupENSG00000141699
BioGRIDFAM134C
STRING (EMBL)FAM134C
ZODIACFAM134C
Ontologies - Pathways
QuickGOQ86VR2
Ontology : AmiGOprotein binding  positive regulation of neuron projection development  integral component of membrane  
Ontology : EGO-EBIprotein binding  positive regulation of neuron projection development  integral component of membrane  
NDEx NetworkFAM134C
Atlas of Cancer Signalling NetworkFAM134C
Wikipedia pathwaysFAM134C
Orthology - Evolution
OrthoDB162427
GeneTree (enSembl)ENSG00000141699
Phylogenetic Trees/Animal Genes : TreeFamFAM134C
HOVERGENQ86VR2
HOGENOMQ86VR2
Homologs : HomoloGeneFAM134C
Homology/Alignments : Family Browser (UCSC)FAM134C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM134C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM134C
dbVarFAM134C
ClinVarFAM134C
1000_GenomesFAM134C 
Exome Variant ServerFAM134C
ExAC (Exome Aggregation Consortium)FAM134C (select the gene name)
Genetic variants : HAPMAP162427
Genomic Variants (DGV)FAM134C [DGVbeta]
DECIPHER (Syndromes)17:40731526-40761445  ENSG00000141699
CONAN: Copy Number AnalysisFAM134C 
Mutations
ICGC Data PortalFAM134C 
TCGA Data PortalFAM134C 
Broad Tumor PortalFAM134C
OASIS PortalFAM134C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM134C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM134C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM134C
DgiDB (Drug Gene Interaction Database)FAM134C
DoCM (Curated mutations)FAM134C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM134C (select a term)
intoGenFAM134C
Cancer3DFAM134C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616498   
Orphanet
MedgenFAM134C
Genetic Testing Registry FAM134C
NextProtQ86VR2 [Medical]
TSGene162427
GENETestsFAM134C
Huge Navigator FAM134C [HugePedia]
snp3D : Map Gene to Disease162427
BioCentury BCIQFAM134C
ClinGenFAM134C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD162427
Chemical/Pharm GKB GenePA162386207
Clinical trialFAM134C
Miscellaneous
canSAR (ICR)FAM134C (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM134C
EVEXFAM134C
GoPubMedFAM134C
iHOPFAM134C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:00:40 CEST 2017

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