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FAM135A (family with sequence similarity 135 member A)

Identity

Alias_namesKIAA1411
KIAA1411
family with sequence similarity 135, member A
Alias_symbol (synonym)FLJ20176
Other alias
HGNC (Hugo) FAM135A
LocusID (NCBI) 57579
Atlas_Id 63024
Location 6q13  [Link to chromosome band 6q13]
Location_base_pair Starts at 70413404 and ends at 70561174 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAM135A (6q13) / NACA (12q13.3)FAM135A (6q13) / RASSF3 (12q14.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM135A   21084
Cards
Entrez_Gene (NCBI)FAM135A  57579  family with sequence similarity 135 member A
AliasesKIAA1411
GeneCards (Weizmann)FAM135A
Ensembl hg19 (Hinxton)ENSG00000082269 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000082269 [Gene_View]  ENSG00000082269 [Sequence]  chr6:70413404-70561174 [Contig_View]  FAM135A [Vega]
ICGC DataPortalENSG00000082269
TCGA cBioPortalFAM135A
AceView (NCBI)FAM135A
Genatlas (Paris)FAM135A
WikiGenes57579
SOURCE (Princeton)FAM135A
Genetics Home Reference (NIH)FAM135A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM135A  -     chr6:70413404-70561174 +  6q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM135A  -     6q13   [Description]    (hg19-Feb_2009)
EnsemblFAM135A - 6q13 [CytoView hg19]  FAM135A - 6q13 [CytoView hg38]
Mapping of homologs : NCBIFAM135A [Mapview hg19]  FAM135A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB037832 AJ420590 AK000183 AK001911 AK002067
RefSeq transcript (Entrez)NM_001105531 NM_001162529 NM_001330995 NM_001330996 NM_001330997 NM_001330998 NM_001330999 NM_001331000 NM_001331001 NM_001331002 NM_001331003 NM_001331004 NM_001331005 NM_001331006 NM_020819
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM135A
Cluster EST : UnigeneHs.211700 [ NCBI ]
CGAP (NCI)Hs.211700
Alternative Splicing GalleryENSG00000082269
Gene ExpressionFAM135A [ NCBI-GEO ]   FAM135A [ EBI - ARRAY_EXPRESS ]   FAM135A [ SEEK ]   FAM135A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM135A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57579
GTEX Portal (Tissue expression)FAM135A
Human Protein AtlasENSG00000082269-FAM135A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2D6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2D6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2D6
Splice isoforms : SwissVarQ9P2D6
PhosPhoSitePlusQ9P2D6
Domains : Interpro (EBI)AB_hydrolase    DUF3657    DUF676_lipase-like   
Domain families : Pfam (Sanger)DUF3657 (PF12394)    DUF676 (PF05057)   
Domain families : Pfam (NCBI)pfam12394    pfam05057   
Conserved Domain (NCBI)FAM135A
DMDM Disease mutations57579
Blocks (Seattle)FAM135A
SuperfamilyQ9P2D6
Human Protein Atlas [tissue]ENSG00000082269-FAM135A [tissue]
Peptide AtlasQ9P2D6
HPRD11144
IPIIPI00025961   IPI00829950   IPI00641083   IPI00879424   IPI00966259   IPI00964138   IPI00965659   IPI00967132   IPI00966064   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2D6
IntAct (EBI)Q9P2D6
FunCoupENSG00000082269
BioGRIDFAM135A
STRING (EMBL)FAM135A
ZODIACFAM135A
Ontologies - Pathways
QuickGOQ9P2D6
Ontology : AmiGOcellular lipid metabolic process  carboxylic ester hydrolase activity  
Ontology : EGO-EBIcellular lipid metabolic process  carboxylic ester hydrolase activity  
NDEx NetworkFAM135A
Atlas of Cancer Signalling NetworkFAM135A
Wikipedia pathwaysFAM135A
Orthology - Evolution
OrthoDB57579
GeneTree (enSembl)ENSG00000082269
Phylogenetic Trees/Animal Genes : TreeFamFAM135A
HOVERGENQ9P2D6
HOGENOMQ9P2D6
Homologs : HomoloGeneFAM135A
Homology/Alignments : Family Browser (UCSC)FAM135A
Gene fusions - Rearrangements
Fusion : QuiverFAM135A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM135A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM135A
dbVarFAM135A
ClinVarFAM135A
1000_GenomesFAM135A 
Exome Variant ServerFAM135A
ExAC (Exome Aggregation Consortium)ENSG00000082269
GNOMAD BrowserENSG00000082269
Varsome BrowserFAM135A
Genetic variants : HAPMAP57579
Genomic Variants (DGV)FAM135A [DGVbeta]
DECIPHERFAM135A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM135A 
Mutations
ICGC Data PortalFAM135A 
TCGA Data PortalFAM135A 
Broad Tumor PortalFAM135A
OASIS PortalFAM135A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM135A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM135A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM135A
DgiDB (Drug Gene Interaction Database)FAM135A
DoCM (Curated mutations)FAM135A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM135A (select a term)
intoGenFAM135A
Cancer3DFAM135A(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM135A
MedgenFAM135A
Genetic Testing Registry FAM135A
NextProtQ9P2D6 [Medical]
TSGene57579
GENETestsFAM135A
Target ValidationFAM135A
Huge Navigator FAM135A [HugePedia]
snp3D : Map Gene to Disease57579
BioCentury BCIQFAM135A
ClinGenFAM135A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57579
Chemical/Pharm GKB GenePA162386230
Clinical trialFAM135A
Miscellaneous
canSAR (ICR)FAM135A (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM135A
EVEXFAM135A
GoPubMedFAM135A
iHOPFAM135A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:44:38 CEST 2018

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