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FAM136A (family with sequence similarity 136 member A)

Identity

Alias_namesfamily with sequence similarity 136, member A
Alias_symbol (synonym)FLJ14668
Other alias-
HGNC (Hugo) FAM136A
LocusID (NCBI) 84908
Atlas_Id 63026
Location 2p13.3  [Link to chromosome band 2p13]
Location_base_pair Starts at 70295976 and ends at 70302045 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM136A (2p13.3) / ATP2B4 (1q32.1)FAM136A (2p13.3) / FAM136A (2p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM136A   25911
Cards
Entrez_Gene (NCBI)FAM136A  84908  family with sequence similarity 136 member A
Aliases
GeneCards (Weizmann)FAM136A
Ensembl hg19 (Hinxton)ENSG00000035141 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000035141 [Gene_View]  chr2:70295976-70302045 [Contig_View]  FAM136A [Vega]
ICGC DataPortalENSG00000035141
TCGA cBioPortalFAM136A
AceView (NCBI)FAM136A
Genatlas (Paris)FAM136A
WikiGenes84908
SOURCE (Princeton)FAM136A
Genetics Home Reference (NIH)FAM136A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM136A  -     chr2:70295976-70302045 -  2p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM136A  -     2p13.3   [Description]    (hg19-Feb_2009)
EnsemblFAM136A - 2p13.3 [CytoView hg19]  FAM136A - 2p13.3 [CytoView hg38]
Mapping of homologs : NCBIFAM136A [Mapview hg19]  FAM136A [Mapview hg38]
OMIM616275   
Gene and transcription
Genbank (Entrez)AK027574 AK225148 AK225151 AK309543 AK315877
RefSeq transcript (Entrez)NM_001329752 NM_001329753 NM_001329755 NM_001329757 NM_001329758 NM_032822
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM136A
Cluster EST : UnigeneHs.516077 [ NCBI ]
CGAP (NCI)Hs.516077
Alternative Splicing GalleryENSG00000035141
Gene ExpressionFAM136A [ NCBI-GEO ]   FAM136A [ EBI - ARRAY_EXPRESS ]   FAM136A [ SEEK ]   FAM136A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM136A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84908
GTEX Portal (Tissue expression)FAM136A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96C01   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96C01  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96C01
Splice isoforms : SwissVarQ96C01
PhosPhoSitePlusQ96C01
Domains : Interpro (EBI)DUF842_euk   
Domain families : Pfam (Sanger)DUF842 (PF05811)   
Domain families : Pfam (NCBI)pfam05811   
Conserved Domain (NCBI)FAM136A
DMDM Disease mutations84908
Blocks (Seattle)FAM136A
SuperfamilyQ96C01
Human Protein AtlasENSG00000035141
Peptide AtlasQ96C01
HPRD07866
IPIIPI00303722   IPI00924885   IPI00927933   IPI00927267   
Protein Interaction databases
DIP (DOE-UCLA)Q96C01
IntAct (EBI)Q96C01
FunCoupENSG00000035141
BioGRIDFAM136A
STRING (EMBL)FAM136A
ZODIACFAM136A
Ontologies - Pathways
QuickGOQ96C01
Ontology : AmiGOcytoplasm  
Ontology : EGO-EBIcytoplasm  
NDEx NetworkFAM136A
Atlas of Cancer Signalling NetworkFAM136A
Wikipedia pathwaysFAM136A
Orthology - Evolution
OrthoDB84908
GeneTree (enSembl)ENSG00000035141
Phylogenetic Trees/Animal Genes : TreeFamFAM136A
HOVERGENQ96C01
HOGENOMQ96C01
Homologs : HomoloGeneFAM136A
Homology/Alignments : Family Browser (UCSC)FAM136A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM136A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM136A
dbVarFAM136A
ClinVarFAM136A
1000_GenomesFAM136A 
Exome Variant ServerFAM136A
ExAC (Exome Aggregation Consortium)FAM136A (select the gene name)
Genetic variants : HAPMAP84908
Genomic Variants (DGV)FAM136A [DGVbeta]
DECIPHERFAM136A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM136A 
Mutations
ICGC Data PortalFAM136A 
TCGA Data PortalFAM136A 
Broad Tumor PortalFAM136A
OASIS PortalFAM136A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM136A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM136A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM136A
DgiDB (Drug Gene Interaction Database)FAM136A
DoCM (Curated mutations)FAM136A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM136A (select a term)
intoGenFAM136A
Cancer3DFAM136A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616275   
Orphanet
MedgenFAM136A
Genetic Testing Registry FAM136A
NextProtQ96C01 [Medical]
TSGene84908
GENETestsFAM136A
Target ValidationFAM136A
Huge Navigator FAM136A [HugePedia]
snp3D : Map Gene to Disease84908
BioCentury BCIQFAM136A
ClinGenFAM136A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84908
Chemical/Pharm GKB GenePA162386322
Clinical trialFAM136A
Miscellaneous
canSAR (ICR)FAM136A (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM136A
EVEXFAM136A
GoPubMedFAM136A
iHOPFAM136A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:36 CEST 2017

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