Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FAM138E (family with sequence similarity 138 member E)

Identity

Alias (NCBI)F379
HGNC (Hugo) FAM138E
HGNC Alias symbF379
HGNC Previous namefamily with sequence similarity 138, member E
LocusID (NCBI) 100124412
Atlas_Id 63031
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 101954885 and ends at 101956355 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM138E   32335
Cards
Entrez_Gene (NCBI)FAM138E  100124412  family with sequence similarity 138 member E
AliasesF379
GeneCards (Weizmann)FAM138E
Ensembl hg19 (Hinxton)ENSG00000248893 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248893 [Gene_View]  ENSG00000248893 [Sequence]  chr15:101954885-101956355 [Contig_View]  FAM138E [Vega]
ICGC DataPortalENSG00000248893
TCGA cBioPortalFAM138E
AceView (NCBI)FAM138E
Genatlas (Paris)FAM138E
WikiGenes100124412
SOURCE (Princeton)FAM138E
Genetics Home Reference (NIH)FAM138E
Genomic and cartography
GoldenPath hg38 (UCSC)FAM138E  -     chr15:101954885-101956355 +  15q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM138E  -     15q26.3   [Description]    (hg19-Feb_2009)
GoldenPathFAM138E - 15q26.3 [CytoView hg19]  FAM138E - 15q26.3 [CytoView hg38]
ImmunoBaseENSG00000248893
genome Data Viewer NCBIFAM138E [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM138E
Alternative Splicing GalleryENSG00000248893
Gene ExpressionFAM138E [ NCBI-GEO ]   FAM138E [ EBI - ARRAY_EXPRESS ]   FAM138E [ SEEK ]   FAM138E [ MEM ]
Gene Expression Viewer (FireBrowse)FAM138E [ Firebrowse - Broad ]
GenevisibleExpression of FAM138E in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100124412
GTEX Portal (Tissue expression)FAM138E
Human Protein AtlasENSG00000248893-FAM138E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM138E
DMDM Disease mutations100124412
Blocks (Seattle)FAM138E
Human Protein Atlas [tissue]ENSG00000248893-FAM138E [tissue]
Protein Interaction databases
FunCoupENSG00000248893
BioGRIDFAM138E
STRING (EMBL)FAM138E
ZODIACFAM138E
Ontologies - Pathways
Huge Navigator FAM138E [HugePedia]
snp3D : Map Gene to Disease100124412
BioCentury BCIQFAM138E
ClinGenFAM138E
Clinical trials, drugs, therapy
Protein Interactions : CTD100124412
Pharm GKB GenePA164719539
Clinical trialFAM138E
Miscellaneous
canSAR (ICR)FAM138E (select the gene name)
HarmonizomeFAM138E
DataMed IndexFAM138E
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM138E
EVEXFAM138E
GoPubMedFAM138E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 15:55:00 CEST 2020

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