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FAM149B1 (family with sequence similarity 149 member B1)

Identity

Alias_namesKIAA0974
KIAA0974
family with sequence similarity 149, member B1
Other alias
HGNC (Hugo) FAM149B1
LocusID (NCBI) 317662
Atlas_Id 63035
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 73168119 and ends at 73242181 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ADK (10q22.2) / FAM149B1 (10q22.2)FAM13C (10q21.1) / FAM149B1 (10q22.2)FAM149B1 (10q22.2) / ADK (10q22.2)
FAM149B1 (10q22.2) / KCNMA1 (10q22.3)INPP5A (10q26.3) / FAM149B1 (10q22.2)TUBB (6p21.33) / FAM149B1 (10q22.2)
INPP5A FAM149B1FAM13C FAM149B1ADK FAM149B1
FAM149B1 KCNMA1FAM149B1 ADK

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM149B1   29162
Cards
Entrez_Gene (NCBI)FAM149B1  317662  family with sequence similarity 149 member B1
AliasesKIAA0974
GeneCards (Weizmann)FAM149B1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:73168119-73242181 [Contig_View]  FAM149B1 [Vega]
TCGA cBioPortalFAM149B1
AceView (NCBI)FAM149B1
Genatlas (Paris)FAM149B1
WikiGenes317662
SOURCE (Princeton)FAM149B1
Genetics Home Reference (NIH)FAM149B1
Genomic and cartography
GoldenPath hg38 (UCSC)FAM149B1  -     chr10:73168119-73242181 +  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM149B1  -     10q22.2   [Description]    (hg19-Feb_2009)
EnsemblFAM149B1 - 10q22.2 [CytoView hg19]  FAM149B1 - 10q22.2 [CytoView hg38]
Mapping of homologs : NCBIFAM149B1 [Mapview hg19]  FAM149B1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB023191 AK023439 AK025189 AK303436 BC015394
RefSeq transcript (Entrez)NM_173348
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM149B1
Cluster EST : UnigeneHs.408577 [ NCBI ]
CGAP (NCI)Hs.408577
Gene ExpressionFAM149B1 [ NCBI-GEO ]   FAM149B1 [ EBI - ARRAY_EXPRESS ]   FAM149B1 [ SEEK ]   FAM149B1 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM149B1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)317662
GTEX Portal (Tissue expression)FAM149B1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BN6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BN6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BN6
Splice isoforms : SwissVarQ96BN6
PhosPhoSitePlusQ96BN6
Domains : Interpro (EBI)DUF3719   
Domain families : Pfam (Sanger)DUF3719 (PF12516)   
Domain families : Pfam (NCBI)pfam12516   
Conserved Domain (NCBI)FAM149B1
DMDM Disease mutations317662
Blocks (Seattle)FAM149B1
SuperfamilyQ96BN6
Peptide AtlasQ96BN6
IPIIPI00032184   IPI00478924   IPI00640325   
Protein Interaction databases
DIP (DOE-UCLA)Q96BN6
IntAct (EBI)Q96BN6
BioGRIDFAM149B1
STRING (EMBL)FAM149B1
ZODIACFAM149B1
Ontologies - Pathways
QuickGOQ96BN6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM149B1
Atlas of Cancer Signalling NetworkFAM149B1
Wikipedia pathwaysFAM149B1
Orthology - Evolution
OrthoDB317662
Phylogenetic Trees/Animal Genes : TreeFamFAM149B1
HOVERGENQ96BN6
HOGENOMQ96BN6
Homologs : HomoloGeneFAM149B1
Homology/Alignments : Family Browser (UCSC)FAM149B1
Gene fusions - Rearrangements
Fusion: TCGAINPP5A FAM149B1
Fusion: TCGAFAM13C FAM149B1
Fusion: TCGAADK FAM149B1
Fusion: TCGAFAM149B1 KCNMA1
Fusion: TCGAFAM149B1 ADK
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM149B1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM149B1
dbVarFAM149B1
ClinVarFAM149B1
1000_GenomesFAM149B1 
Exome Variant ServerFAM149B1
ExAC (Exome Aggregation Consortium)FAM149B1 (select the gene name)
Genetic variants : HAPMAP317662
Genomic Variants (DGV)FAM149B1 [DGVbeta]
DECIPHERFAM149B1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM149B1 
Mutations
ICGC Data PortalFAM149B1 
TCGA Data PortalFAM149B1 
Broad Tumor PortalFAM149B1
OASIS PortalFAM149B1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM149B1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM149B1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM149B1
DgiDB (Drug Gene Interaction Database)FAM149B1
DoCM (Curated mutations)FAM149B1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM149B1 (select a term)
intoGenFAM149B1
Cancer3DFAM149B1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM149B1
Genetic Testing Registry FAM149B1
NextProtQ96BN6 [Medical]
TSGene317662
GENETestsFAM149B1
Target ValidationFAM149B1
Huge Navigator FAM149B1 [HugePedia]
snp3D : Map Gene to Disease317662
BioCentury BCIQFAM149B1
ClinGenFAM149B1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD317662
Chemical/Pharm GKB GenePA162386399
Clinical trialFAM149B1
Miscellaneous
canSAR (ICR)FAM149B1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM149B1
EVEXFAM149B1
GoPubMedFAM149B1
iHOPFAM149B1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:37 CEST 2017

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