Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM150A (family with sequence similarity 150 member A)

Identity

Alias_namesfamily with sequence similarity 150
Alias_symbol (synonym)UNQ9433
AUGB
Other alias
HGNC (Hugo) FAM150A
LocusID (NCBI) 389658
Atlas_Id 55878
Location 8q11.23  [Link to chromosome band 8q11]
Location_base_pair Starts at 53446597 and ends at 53478021 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM150A   33775
Cards
Entrez_Gene (NCBI)FAM150A  389658  family with sequence similarity 150 member A
AliasesUNQ9433
GeneCards (Weizmann)FAM150A
Ensembl hg19 (Hinxton)ENSG00000196711 [Gene_View]  chr8:53446597-53478021 [Contig_View]  FAM150A [Vega]
Ensembl hg38 (Hinxton)ENSG00000196711 [Gene_View]  chr8:53446597-53478021 [Contig_View]  FAM150A [Vega]
ICGC DataPortalENSG00000196711
TCGA cBioPortalFAM150A
AceView (NCBI)FAM150A
Genatlas (Paris)FAM150A
WikiGenes389658
SOURCE (Princeton)FAM150A
Genetics Home Reference (NIH)FAM150A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM150A  -     chr8:53446597-53478021 -  8q11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM150A  -     8q11.23   [Description]    (hg38-Dec_2013)
EnsemblFAM150A - 8q11.23 [CytoView hg19]  FAM150A - 8q11.23 [CytoView hg38]
Mapping of homologs : NCBIFAM150A [Mapview hg19]  FAM150A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI858920 AY358213 BC130641 BC130643 BC144534
RefSeq transcript (Entrez)NM_207413
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM150A
Cluster EST : UnigeneHs.527111 [ NCBI ]
CGAP (NCI)Hs.527111
Alternative Splicing GalleryENSG00000196711
Gene ExpressionFAM150A [ NCBI-GEO ]   FAM150A [ EBI - ARRAY_EXPRESS ]   FAM150A [ SEEK ]   FAM150A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM150A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389658
GTEX Portal (Tissue expression)FAM150A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXT8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXT8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXT8
Splice isoforms : SwissVarQ6UXT8
PhosPhoSitePlusQ6UXT8
Domains : Interpro (EBI)FAM150   
Domain families : Pfam (Sanger)FAM150 (PF15129)   
Domain families : Pfam (NCBI)pfam15129   
Conserved Domain (NCBI)FAM150A
DMDM Disease mutations389658
Blocks (Seattle)FAM150A
SuperfamilyQ6UXT8
Human Protein AtlasENSG00000196711
Peptide AtlasQ6UXT8
HPRD15623
IPIIPI00399032   IPI00981794   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXT8
IntAct (EBI)Q6UXT8
FunCoupENSG00000196711
BioGRIDFAM150A
STRING (EMBL)FAM150A
ZODIACFAM150A
Ontologies - Pathways
QuickGOQ6UXT8
Ontology : AmiGOprotein binding  extracellular region  positive regulation of neuron projection development  receptor signaling protein tyrosine kinase activator activity  receptor tyrosine kinase binding  positive regulation of protein tyrosine kinase activity  positive regulation of ERK1 and ERK2 cascade  positive regulation of ERK5 cascade  
Ontology : EGO-EBIprotein binding  extracellular region  positive regulation of neuron projection development  receptor signaling protein tyrosine kinase activator activity  receptor tyrosine kinase binding  positive regulation of protein tyrosine kinase activity  positive regulation of ERK1 and ERK2 cascade  positive regulation of ERK5 cascade  
NDEx NetworkFAM150A
Atlas of Cancer Signalling NetworkFAM150A
Wikipedia pathwaysFAM150A
Orthology - Evolution
OrthoDB389658
GeneTree (enSembl)ENSG00000196711
Phylogenetic Trees/Animal Genes : TreeFamFAM150A
HOVERGENQ6UXT8
HOGENOMQ6UXT8
Homologs : HomoloGeneFAM150A
Homology/Alignments : Family Browser (UCSC)FAM150A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM150A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM150A
dbVarFAM150A
ClinVarFAM150A
1000_GenomesFAM150A 
Exome Variant ServerFAM150A
ExAC (Exome Aggregation Consortium)FAM150A (select the gene name)
Genetic variants : HAPMAP389658
Genomic Variants (DGV)FAM150A [DGVbeta]
DECIPHER (Syndromes)8:53446597-53478021  ENSG00000196711
CONAN: Copy Number AnalysisFAM150A 
Mutations
ICGC Data PortalFAM150A 
TCGA Data PortalFAM150A 
Broad Tumor PortalFAM150A
OASIS PortalFAM150A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM150A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM150A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM150A
DgiDB (Drug Gene Interaction Database)FAM150A
DoCM (Curated mutations)FAM150A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM150A (select a term)
intoGenFAM150A
Cancer3DFAM150A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM150A
Genetic Testing Registry FAM150A
NextProtQ6UXT8 [Medical]
TSGene389658
GENETestsFAM150A
Huge Navigator FAM150A [HugePedia]
snp3D : Map Gene to Disease389658
BioCentury BCIQFAM150A
ClinGenFAM150A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389658
Chemical/Pharm GKB GenePA162386433
Clinical trialFAM150A
Miscellaneous
canSAR (ICR)FAM150A (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM150A
EVEXFAM150A
GoPubMedFAM150A
iHOPFAM150A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 15:00:41 CEST 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.