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FAM151A (family with sequence similarity 151 member A)

Identity

Alias_namesC1orf179
chromosome 1 open reading frame 179
family with sequence similarity 151, member A
Alias_symbol (synonym)MGC27169
Other alias
HGNC (Hugo) FAM151A
LocusID (NCBI) 338094
Atlas_Id 63038
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 54609177 and ends at 54623527 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MKNK2 (19p13.3) / FAM151A (1p32.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM151A   25032
Cards
Entrez_Gene (NCBI)FAM151A  338094  family with sequence similarity 151 member A
AliasesC1orf179
GeneCards (Weizmann)FAM151A
Ensembl hg19 (Hinxton)ENSG00000162391 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162391 [Gene_View]  chr1:54609177-54623527 [Contig_View]  FAM151A [Vega]
ICGC DataPortalENSG00000162391
TCGA cBioPortalFAM151A
AceView (NCBI)FAM151A
Genatlas (Paris)FAM151A
WikiGenes338094
SOURCE (Princeton)FAM151A
Genetics Home Reference (NIH)FAM151A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM151A  -     chr1:54609177-54623527 -  1p32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM151A  -     1p32.3   [Description]    (hg19-Feb_2009)
EnsemblFAM151A - 1p32.3 [CytoView hg19]  FAM151A - 1p32.3 [CytoView hg38]
Mapping of homologs : NCBIFAM151A [Mapview hg19]  FAM151A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091901 AY358629 BC015993 BC020874 BC073921
RefSeq transcript (Entrez)NM_176782
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM151A
Cluster EST : UnigeneHs.745173 [ NCBI ]
CGAP (NCI)Hs.745173
Alternative Splicing GalleryENSG00000162391
Gene ExpressionFAM151A [ NCBI-GEO ]   FAM151A [ EBI - ARRAY_EXPRESS ]   FAM151A [ SEEK ]   FAM151A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM151A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338094
GTEX Portal (Tissue expression)FAM151A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WW52   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WW52  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WW52
Splice isoforms : SwissVarQ8WW52
PhosPhoSitePlusQ8WW52
Domains : Interpro (EBI)DUF2181   
Domain families : Pfam (Sanger)DUF2181 (PF10223)   
Domain families : Pfam (NCBI)pfam10223   
Conserved Domain (NCBI)FAM151A
DMDM Disease mutations338094
Blocks (Seattle)FAM151A
SuperfamilyQ8WW52
Human Protein AtlasENSG00000162391
Peptide AtlasQ8WW52
HPRD11326
IPIIPI00300865   IPI00064917   
Protein Interaction databases
DIP (DOE-UCLA)Q8WW52
IntAct (EBI)Q8WW52
FunCoupENSG00000162391
BioGRIDFAM151A
STRING (EMBL)FAM151A
ZODIACFAM151A
Ontologies - Pathways
QuickGOQ8WW52
Ontology : AmiGOmolecular_function  biological_process  membrane  integral component of membrane  extracellular exosome  
Ontology : EGO-EBImolecular_function  biological_process  membrane  integral component of membrane  extracellular exosome  
NDEx NetworkFAM151A
Atlas of Cancer Signalling NetworkFAM151A
Wikipedia pathwaysFAM151A
Orthology - Evolution
OrthoDB338094
GeneTree (enSembl)ENSG00000162391
Phylogenetic Trees/Animal Genes : TreeFamFAM151A
HOVERGENQ8WW52
HOGENOMQ8WW52
Homologs : HomoloGeneFAM151A
Homology/Alignments : Family Browser (UCSC)FAM151A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM151A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM151A
dbVarFAM151A
ClinVarFAM151A
1000_GenomesFAM151A 
Exome Variant ServerFAM151A
ExAC (Exome Aggregation Consortium)FAM151A (select the gene name)
Genetic variants : HAPMAP338094
Genomic Variants (DGV)FAM151A [DGVbeta]
DECIPHERFAM151A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM151A 
Mutations
ICGC Data PortalFAM151A 
TCGA Data PortalFAM151A 
Broad Tumor PortalFAM151A
OASIS PortalFAM151A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM151A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM151A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM151A
DgiDB (Drug Gene Interaction Database)FAM151A
DoCM (Curated mutations)FAM151A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM151A (select a term)
intoGenFAM151A
Cancer3DFAM151A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM151A
Genetic Testing Registry FAM151A
NextProtQ8WW52 [Medical]
TSGene338094
GENETestsFAM151A
Target ValidationFAM151A
Huge Navigator FAM151A [HugePedia]
snp3D : Map Gene to Disease338094
BioCentury BCIQFAM151A
ClinGenFAM151A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338094
Chemical/Pharm GKB GenePA162386465
Clinical trialFAM151A
Miscellaneous
canSAR (ICR)FAM151A (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM151A
EVEXFAM151A
GoPubMedFAM151A
iHOPFAM151A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:37 CEST 2017

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