Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FAM155A-IT1 (FAM155A intronic transcript 1)

Identity

Alias_namesFAM155A intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) FAM155A-IT1
LocusID (NCBI) 100874375
Atlas_Id 63044
Location 13q33.3  [Link to chromosome band 13q33]
Location_base_pair Starts at 107787361 and ends at 107835458 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM155A-IT1   41503
Cards
Entrez_Gene (NCBI)FAM155A-IT1  100874375  FAM155A intronic transcript 1
Aliases
GeneCards (Weizmann)FAM155A-IT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:107787361-107835458 [Contig_View]  FAM155A-IT1 [Vega]
TCGA cBioPortalFAM155A-IT1
AceView (NCBI)FAM155A-IT1
Genatlas (Paris)FAM155A-IT1
WikiGenes100874375
SOURCE (Princeton)FAM155A-IT1
Genetics Home Reference (NIH)FAM155A-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)FAM155A-IT1  -     chr13:107787361-107835458 -  13q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM155A-IT1  -     13q33.3   [Description]    (hg19-Feb_2009)
EnsemblFAM155A-IT1 - 13q33.3 [CytoView hg19]  FAM155A-IT1 - 13q33.3 [CytoView hg38]
Mapping of homologs : NCBIFAM155A-IT1 [Mapview hg19]  FAM155A-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043519 BI831413
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM155A-IT1
Cluster EST : UnigeneHs.653972 [ NCBI ]
CGAP (NCI)Hs.653972
Gene ExpressionFAM155A-IT1 [ NCBI-GEO ]   FAM155A-IT1 [ EBI - ARRAY_EXPRESS ]   FAM155A-IT1 [ SEEK ]   FAM155A-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM155A-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874375
GTEX Portal (Tissue expression)FAM155A-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM155A-IT1
DMDM Disease mutations100874375
Blocks (Seattle)FAM155A-IT1
Protein Interaction databases
BioGRIDFAM155A-IT1
STRING (EMBL)FAM155A-IT1
ZODIACFAM155A-IT1
Ontologies - Pathways
Huge Navigator FAM155A-IT1 [HugePedia]
snp3D : Map Gene to Disease100874375
BioCentury BCIQFAM155A-IT1
ClinGenFAM155A-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874375
Clinical trialFAM155A-IT1
Miscellaneous
canSAR (ICR)FAM155A-IT1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM155A-IT1
EVEXFAM155A-IT1
GoPubMedFAM155A-IT1
iHOPFAM155A-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:46:32 CET 2017

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