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FAM155A (family with sequence similarity 155, member A)

Identity

Alias_namesfamily with sequence similarity 155, member A
Other alias-
HGNC (Hugo) FAM155A
LocusID (NCBI) 728215
Atlas_Id 63043
Location 13q33.3  [Link to chromosome band 13q33]
Location_base_pair Starts at 107820879 and ends at 108519460 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
EXT1 (8q24.11) / FAM155A (13q33.3)FAM155A (13q33.3) / ADIPOR1 (1q32.1)FAM155A (13q33.3) / ATP11A (13q34)
FAM155A (13q33.3) / FAM155A (13q33.3)FAM155A (13q33.3) / NQO1 (16q22.1)FAM155A (13q33.3) / TUBGCP2 (10q26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM155A   33877
Cards
Entrez_Gene (NCBI)FAM155A  728215  family with sequence similarity 155, member A
Aliases
GeneCards (Weizmann)FAM155A
Ensembl hg19 (Hinxton) [Gene_View]  chr13:107820879-108519460 [Contig_View]  FAM155A [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:107820879-108519460 [Contig_View]  FAM155A [Vega]
TCGA cBioPortalFAM155A
AceView (NCBI)FAM155A
Genatlas (Paris)FAM155A
WikiGenes728215
SOURCE (Princeton)FAM155A
Genetics Home Reference (NIH)FAM155A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM155A  -     chr13:107820879-108519460 -  13q33.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM155A  -     13q33.3   [Description]    (hg38-Dec_2013)
EnsemblFAM155A - 13q33.3 [CytoView hg19]  FAM155A - 13q33.3 [CytoView hg38]
Mapping of homologs : NCBIFAM155A [Mapview hg19]  FAM155A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK295445 AW592075 BC146878 BC157830 BC157855
RefSeq transcript (Entrez)NM_001080396
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_009952 NW_004929389
Consensus coding sequences : CCDS (NCBI)FAM155A
Cluster EST : UnigeneHs.535394 [ NCBI ]
CGAP (NCI)Hs.535394
Gene ExpressionFAM155A [ NCBI-GEO ]   FAM155A [ EBI - ARRAY_EXPRESS ]   FAM155A [ SEEK ]   FAM155A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM155A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728215
GTEX Portal (Tissue expression)FAM155A
Protein : pattern, domain, 3D structure
UniProt/SwissProtB1AL88   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB1AL88  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB1AL88
Splice isoforms : SwissVarB1AL88
PhosPhoSitePlusB1AL88
Domains : Interpro (EBI)FAM155   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM155A
DMDM Disease mutations728215
Blocks (Seattle)FAM155A
SuperfamilyB1AL88
Peptide AtlasB1AL88
IPIIPI00477621   
Protein Interaction databases
DIP (DOE-UCLA)B1AL88
IntAct (EBI)B1AL88
BioGRIDFAM155A
STRING (EMBL)FAM155A
ZODIACFAM155A
Ontologies - Pathways
QuickGOB1AL88
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkFAM155A
Atlas of Cancer Signalling NetworkFAM155A
Wikipedia pathwaysFAM155A
Orthology - Evolution
OrthoDB728215
Phylogenetic Trees/Animal Genes : TreeFamFAM155A
HOVERGENB1AL88
HOGENOMB1AL88
Homologs : HomoloGeneFAM155A
Homology/Alignments : Family Browser (UCSC)FAM155A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM155A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM155A
dbVarFAM155A
ClinVarFAM155A
1000_GenomesFAM155A 
Exome Variant ServerFAM155A
ExAC (Exome Aggregation Consortium)FAM155A (select the gene name)
Genetic variants : HAPMAP728215
Genomic Variants (DGV)FAM155A [DGVbeta]
DECIPHER (Syndromes)13:107820879-108519460  
CONAN: Copy Number AnalysisFAM155A 
Mutations
ICGC Data PortalFAM155A 
TCGA Data PortalFAM155A 
Broad Tumor PortalFAM155A
OASIS PortalFAM155A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM155A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM155A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM155A
DgiDB (Drug Gene Interaction Database)FAM155A
DoCM (Curated mutations)FAM155A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM155A (select a term)
intoGenFAM155A
Cancer3DFAM155A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM155A
Genetic Testing Registry FAM155A
NextProtB1AL88 [Medical]
TSGene728215
GENETestsFAM155A
Huge Navigator FAM155A [HugePedia]
snp3D : Map Gene to Disease728215
BioCentury BCIQFAM155A
ClinGenFAM155A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728215
Chemical/Pharm GKB GenePA162386676
Clinical trialFAM155A
Miscellaneous
canSAR (ICR)FAM155A (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM155A
EVEXFAM155A
GoPubMedFAM155A
iHOPFAM155A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:34 CET 2017

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