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FAM155B (family with sequence similarity 155 member B)

Identity

Alias_namesTMEM28
CXorf63
transmembrane protein 28
chromosome X open reading frame 63
family with sequence similarity 155, member B
Alias_symbol (synonym)TED
Other aliasbB57D9.1
HGNC (Hugo) FAM155B
LocusID (NCBI) 27112
Atlas_Id 63045
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 69505235 and ends at 69532508 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM155B   30701
Cards
Entrez_Gene (NCBI)FAM155B  27112  family with sequence similarity 155 member B
AliasesCXorf63; TED; TMEM28; bB57D9.1
GeneCards (Weizmann)FAM155B
Ensembl hg19 (Hinxton)ENSG00000130054 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130054 [Gene_View]  chrX:69505235-69532508 [Contig_View]  FAM155B [Vega]
ICGC DataPortalENSG00000130054
TCGA cBioPortalFAM155B
AceView (NCBI)FAM155B
Genatlas (Paris)FAM155B
WikiGenes27112
SOURCE (Princeton)FAM155B
Genetics Home Reference (NIH)FAM155B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM155B  -     chrX:69505235-69532508 +  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM155B  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblFAM155B - Xq13.1 [CytoView hg19]  FAM155B - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBIFAM155B [Mapview hg19]  FAM155B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF087142 BC136518 BC136519
RefSeq transcript (Entrez)NM_015686
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM155B
Cluster EST : UnigeneHs.87619 [ NCBI ]
CGAP (NCI)Hs.87619
Alternative Splicing GalleryENSG00000130054
Gene ExpressionFAM155B [ NCBI-GEO ]   FAM155B [ EBI - ARRAY_EXPRESS ]   FAM155B [ SEEK ]   FAM155B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM155B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27112
GTEX Portal (Tissue expression)FAM155B
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75949   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75949  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75949
Splice isoforms : SwissVarO75949
PhosPhoSitePlusO75949
Domains : Interpro (EBI)FAM155   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM155B
DMDM Disease mutations27112
Blocks (Seattle)FAM155B
SuperfamilyO75949
Human Protein AtlasENSG00000130054
Peptide AtlasO75949
HPRD06740
IPIIPI00290828   IPI00895903   
Protein Interaction databases
DIP (DOE-UCLA)O75949
IntAct (EBI)O75949
FunCoupENSG00000130054
BioGRIDFAM155B
STRING (EMBL)FAM155B
ZODIACFAM155B
Ontologies - Pathways
QuickGOO75949
Ontology : AmiGOplasma membrane  stretch-activated, cation-selective, calcium channel activity  integral component of membrane  calcium ion import across plasma membrane  
Ontology : EGO-EBIplasma membrane  stretch-activated, cation-selective, calcium channel activity  integral component of membrane  calcium ion import across plasma membrane  
NDEx NetworkFAM155B
Atlas of Cancer Signalling NetworkFAM155B
Wikipedia pathwaysFAM155B
Orthology - Evolution
OrthoDB27112
GeneTree (enSembl)ENSG00000130054
Phylogenetic Trees/Animal Genes : TreeFamFAM155B
HOVERGENO75949
HOGENOMO75949
Homologs : HomoloGeneFAM155B
Homology/Alignments : Family Browser (UCSC)FAM155B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM155B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM155B
dbVarFAM155B
ClinVarFAM155B
1000_GenomesFAM155B 
Exome Variant ServerFAM155B
ExAC (Exome Aggregation Consortium)FAM155B (select the gene name)
Genetic variants : HAPMAP27112
Genomic Variants (DGV)FAM155B [DGVbeta]
DECIPHERFAM155B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM155B 
Mutations
ICGC Data PortalFAM155B 
TCGA Data PortalFAM155B 
Broad Tumor PortalFAM155B
OASIS PortalFAM155B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM155B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM155B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch FAM155B
DgiDB (Drug Gene Interaction Database)FAM155B
DoCM (Curated mutations)FAM155B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM155B (select a term)
intoGenFAM155B
Cancer3DFAM155B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM155B
Genetic Testing Registry FAM155B
NextProtO75949 [Medical]
TSGene27112
GENETestsFAM155B
Target ValidationFAM155B
Huge Navigator FAM155B [HugePedia]
snp3D : Map Gene to Disease27112
BioCentury BCIQFAM155B
ClinGenFAM155B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27112
Chemical/Pharm GKB GenePA162386687
Clinical trialFAM155B
Miscellaneous
canSAR (ICR)FAM155B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM155B
EVEXFAM155B
GoPubMedFAM155B
iHOPFAM155B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:38 CEST 2017

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