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FAM156B (family with sequence similarity 156, member B)

Identity

Alias_namesTMEM29B
transmembrane protein 29B
family with sequence similarity 156, member B
Other alias
HGNC (Hugo) FAM156B
LocusID (NCBI) 727866
Atlas_Id 63047
Location Xp11.22  [Link to chromosome band Xp11]
Location_base_pair Starts at 52928409 and ends at 52937585 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MRPL22 (5q33.2) / FAM156B (Xp11.22)PCGF3 (4p16.3) / FAM156B (Xp11.22)RBM14-RBM4 (11q13.2) / FAM156B (Xp11.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM156B   31962
Cards
Entrez_Gene (NCBI)FAM156B  727866  family with sequence similarity 156, member B
AliasesTMEM29B
GeneCards (Weizmann)FAM156B
Ensembl hg19 (Hinxton)ENSG00000179304 [Gene_View]  chrX:52928409-52937585 [Contig_View]  FAM156B [Vega]
Ensembl hg38 (Hinxton)ENSG00000179304 [Gene_View]  chrX:52928409-52937585 [Contig_View]  FAM156B [Vega]
ICGC DataPortalENSG00000179304
TCGA cBioPortalFAM156B
AceView (NCBI)FAM156B
Genatlas (Paris)FAM156B
WikiGenes727866
SOURCE (Princeton)FAM156B
Genetics Home Reference (NIH)FAM156B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM156B  -     chrX:52928409-52937585 +  Xp11.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM156B  -     Xp11.22   [Description]    (hg38-Dec_2013)
EnsemblFAM156B - Xp11.22 [CytoView hg19]  FAM156B - Xp11.22 [CytoView hg38]
Mapping of homologs : NCBIFAM156B [Mapview hg19]  FAM156B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091598 BX649013
RefSeq transcript (Entrez)NM_001099684
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011630 NW_004929442
Consensus coding sequences : CCDS (NCBI)FAM156B
Cluster EST : UnigeneHs.6451 [ NCBI ]
CGAP (NCI)Hs.6451
Alternative Splicing GalleryENSG00000179304
Gene ExpressionFAM156B [ NCBI-GEO ]   FAM156B [ EBI - ARRAY_EXPRESS ]   FAM156B [ SEEK ]   FAM156B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM156B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)727866
GTEX Portal (Tissue expression)FAM156B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NDB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NDB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NDB6
Splice isoforms : SwissVarQ8NDB6
PhosPhoSitePlusQ8NDB6
Domains : Interpro (EBI)Dppa3   
Domain families : Pfam (Sanger)PGC7_Stella (PF15549)   
Domain families : Pfam (NCBI)pfam15549   
Conserved Domain (NCBI)FAM156B
DMDM Disease mutations727866
Blocks (Seattle)FAM156B
SuperfamilyQ8NDB6
Human Protein AtlasENSG00000179304
Peptide AtlasQ8NDB6
Protein Interaction databases
DIP (DOE-UCLA)Q8NDB6
IntAct (EBI)Q8NDB6
FunCoupENSG00000179304
BioGRIDFAM156B
STRING (EMBL)FAM156B
ZODIACFAM156B
Ontologies - Pathways
QuickGOQ8NDB6
Ontology : AmiGOprotein binding  nuclear envelope  integral component of membrane  methylated histone binding  
Ontology : EGO-EBIprotein binding  nuclear envelope  integral component of membrane  methylated histone binding  
NDEx NetworkFAM156B
Atlas of Cancer Signalling NetworkFAM156B
Wikipedia pathwaysFAM156B
Orthology - Evolution
OrthoDB727866
GeneTree (enSembl)ENSG00000179304
Phylogenetic Trees/Animal Genes : TreeFamFAM156B
HOVERGENQ8NDB6
HOGENOMQ8NDB6
Homologs : HomoloGeneFAM156B
Homology/Alignments : Family Browser (UCSC)FAM156B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM156B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM156B
dbVarFAM156B
ClinVarFAM156B
1000_GenomesFAM156B 
Exome Variant ServerFAM156B
ExAC (Exome Aggregation Consortium)FAM156B (select the gene name)
Genetic variants : HAPMAP727866
Genomic Variants (DGV)FAM156B [DGVbeta]
DECIPHER (Syndromes)X:52928409-52937585  ENSG00000179304
CONAN: Copy Number AnalysisFAM156B 
Mutations
ICGC Data PortalFAM156B 
TCGA Data PortalFAM156B 
Broad Tumor PortalFAM156B
OASIS PortalFAM156B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM156B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM156B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM156B
DgiDB (Drug Gene Interaction Database)FAM156B
DoCM (Curated mutations)FAM156B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM156B (select a term)
intoGenFAM156B
Cancer3DFAM156B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM156B
Genetic Testing Registry FAM156B
NextProtQ8NDB6 [Medical]
TSGene727866
GENETestsFAM156B
Huge Navigator FAM156B [HugePedia]
snp3D : Map Gene to Disease727866
BioCentury BCIQFAM156B
ClinGenFAM156B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727866
Chemical/Pharm GKB GenePA162386699
Clinical trialFAM156B
Miscellaneous
canSAR (ICR)FAM156B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM156B
EVEXFAM156B
GoPubMedFAM156B
iHOPFAM156B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:35 CET 2017

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