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FAM157C (family with sequence similarity 157 member C (non-protein coding))

Identity

Alias_namesfamily with sequence similarity 157, member C
Other alias-
HGNC (Hugo) FAM157C
LocusID (NCBI) 100996541
Atlas_Id 63050
Location 16q24.3  [Link to chromosome band 16q24]
Location_base_pair Starts at 90102264 and ends at 90177606 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM157C   34081
Cards
Entrez_Gene (NCBI)FAM157C  100996541  family with sequence similarity 157 member C (non-protein coding)
Aliases
GeneCards (Weizmann)FAM157C
Ensembl hg19 (Hinxton)ENSG00000260528 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260528 [Gene_View]  chr16:90102264-90177606 [Contig_View]  FAM157C [Vega]
ICGC DataPortalENSG00000260528
TCGA cBioPortalFAM157C
AceView (NCBI)FAM157C
Genatlas (Paris)FAM157C
WikiGenes100996541
SOURCE (Princeton)FAM157C
Genetics Home Reference (NIH)FAM157C
Genomic and cartography
GoldenPath hg38 (UCSC)FAM157C  -     chr16:90102264-90177606 +  16q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM157C  -     16q24.3   [Description]    (hg19-Feb_2009)
EnsemblFAM157C - 16q24.3 [CytoView hg19]  FAM157C - 16q24.3 [CytoView hg38]
Mapping of homologs : NCBIFAM157C [Mapview hg19]  FAM157C [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX459292 DA670997 DB461851
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM157C
Cluster EST : UnigeneHs.652849 [ NCBI ]
CGAP (NCI)Hs.652849
Alternative Splicing GalleryENSG00000260528
Gene ExpressionFAM157C [ NCBI-GEO ]   FAM157C [ EBI - ARRAY_EXPRESS ]   FAM157C [ SEEK ]   FAM157C [ MEM ]
Gene Expression Viewer (FireBrowse)FAM157C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100996541
GTEX Portal (Tissue expression)FAM157C
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG43   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG43  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG43
Splice isoforms : SwissVarP0CG43
PhosPhoSitePlusP0CG43
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM157C
DMDM Disease mutations100996541
Blocks (Seattle)FAM157C
SuperfamilyP0CG43
Human Protein AtlasENSG00000260528
Peptide AtlasP0CG43
Protein Interaction databases
DIP (DOE-UCLA)P0CG43
IntAct (EBI)P0CG43
FunCoupENSG00000260528
BioGRIDFAM157C
STRING (EMBL)FAM157C
ZODIACFAM157C
Ontologies - Pathways
QuickGOP0CG43
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM157C
Atlas of Cancer Signalling NetworkFAM157C
Wikipedia pathwaysFAM157C
Orthology - Evolution
OrthoDB100996541
GeneTree (enSembl)ENSG00000260528
Phylogenetic Trees/Animal Genes : TreeFamFAM157C
HOVERGENP0CG43
HOGENOMP0CG43
Homologs : HomoloGeneFAM157C
Homology/Alignments : Family Browser (UCSC)FAM157C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM157C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM157C
dbVarFAM157C
ClinVarFAM157C
1000_GenomesFAM157C 
Exome Variant ServerFAM157C
ExAC (Exome Aggregation Consortium)FAM157C (select the gene name)
Genetic variants : HAPMAP100996541
Genomic Variants (DGV)FAM157C [DGVbeta]
DECIPHERFAM157C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM157C 
Mutations
ICGC Data PortalFAM157C 
TCGA Data PortalFAM157C 
Broad Tumor PortalFAM157C
OASIS PortalFAM157C [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM157C
BioMutasearch FAM157C
DgiDB (Drug Gene Interaction Database)FAM157C
DoCM (Curated mutations)FAM157C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM157C (select a term)
intoGenFAM157C
Cancer3DFAM157C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM157C
Genetic Testing Registry FAM157C
NextProtP0CG43 [Medical]
TSGene100996541
GENETestsFAM157C
Target ValidationFAM157C
Huge Navigator FAM157C [HugePedia]
snp3D : Map Gene to Disease100996541
BioCentury BCIQFAM157C
ClinGenFAM157C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996541
Clinical trialFAM157C
Miscellaneous
canSAR (ICR)FAM157C (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM157C
EVEXFAM157C
GoPubMedFAM157C
iHOPFAM157C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:39 CEST 2017

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