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FAM161B (family with sequence similarity 161 member B)

Identity

Alias_namesC14orf44
chromosome 14 open reading frame 44
family with sequence similarity 161, member B
Alias_symbol (synonym)FLJ31697
Other aliasc14_5547
HGNC (Hugo) FAM161B
LocusID (NCBI) 145483
Atlas_Id 63056
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 73932992 and ends at 73950414 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM161B   19854
Cards
Entrez_Gene (NCBI)FAM161B  145483  family with sequence similarity 161 member B
AliasesC14orf44; c14_5547
GeneCards (Weizmann)FAM161B
Ensembl hg19 (Hinxton)ENSG00000156050 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156050 [Gene_View]  chr14:73932992-73950414 [Contig_View]  FAM161B [Vega]
ICGC DataPortalENSG00000156050
TCGA cBioPortalFAM161B
AceView (NCBI)FAM161B
Genatlas (Paris)FAM161B
WikiGenes145483
SOURCE (Princeton)FAM161B
Genetics Home Reference (NIH)FAM161B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM161B  -     chr14:73932992-73950414 -  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM161B  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblFAM161B - 14q24.3 [CytoView hg19]  FAM161B - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIFAM161B [Mapview hg19]  FAM161B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI082216 AK056259 AK302982 AW274700 BC053909
RefSeq transcript (Entrez)NM_152445
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM161B
Cluster EST : UnigeneHs.660789 [ NCBI ]
CGAP (NCI)Hs.660789
Alternative Splicing GalleryENSG00000156050
Gene ExpressionFAM161B [ NCBI-GEO ]   FAM161B [ EBI - ARRAY_EXPRESS ]   FAM161B [ SEEK ]   FAM161B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM161B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145483
GTEX Portal (Tissue expression)FAM161B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96MY7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96MY7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96MY7
Splice isoforms : SwissVarQ96MY7
PhosPhoSitePlusQ96MY7
Domains : Interpro (EBI)UPF0564   
Domain families : Pfam (Sanger)UPF0564 (PF10595)   
Domain families : Pfam (NCBI)pfam10595   
Conserved Domain (NCBI)FAM161B
DMDM Disease mutations145483
Blocks (Seattle)FAM161B
SuperfamilyQ96MY7
Human Protein AtlasENSG00000156050
Peptide AtlasQ96MY7
HPRD12649
IPIIPI01009729   IPI00043526   IPI01025180   
Protein Interaction databases
DIP (DOE-UCLA)Q96MY7
IntAct (EBI)Q96MY7
FunCoupENSG00000156050
BioGRIDFAM161B
STRING (EMBL)FAM161B
ZODIACFAM161B
Ontologies - Pathways
QuickGOQ96MY7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM161B
Atlas of Cancer Signalling NetworkFAM161B
Wikipedia pathwaysFAM161B
Orthology - Evolution
OrthoDB145483
GeneTree (enSembl)ENSG00000156050
Phylogenetic Trees/Animal Genes : TreeFamFAM161B
HOVERGENQ96MY7
HOGENOMQ96MY7
Homologs : HomoloGeneFAM161B
Homology/Alignments : Family Browser (UCSC)FAM161B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM161B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM161B
dbVarFAM161B
ClinVarFAM161B
1000_GenomesFAM161B 
Exome Variant ServerFAM161B
ExAC (Exome Aggregation Consortium)FAM161B (select the gene name)
Genetic variants : HAPMAP145483
Genomic Variants (DGV)FAM161B [DGVbeta]
DECIPHERFAM161B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM161B 
Mutations
ICGC Data PortalFAM161B 
TCGA Data PortalFAM161B 
Broad Tumor PortalFAM161B
OASIS PortalFAM161B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM161B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM161B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM161B
DgiDB (Drug Gene Interaction Database)FAM161B
DoCM (Curated mutations)FAM161B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM161B (select a term)
intoGenFAM161B
Cancer3DFAM161B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM161B
Genetic Testing Registry FAM161B
NextProtQ96MY7 [Medical]
TSGene145483
GENETestsFAM161B
Target ValidationFAM161B
Huge Navigator FAM161B [HugePedia]
snp3D : Map Gene to Disease145483
BioCentury BCIQFAM161B
ClinGenFAM161B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145483
Chemical/Pharm GKB GenePA162386893
Clinical trialFAM161B
Miscellaneous
canSAR (ICR)FAM161B (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM161B
EVEXFAM161B
GoPubMedFAM161B
iHOPFAM161B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:47:56 CEST 2017

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