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FAM163B (family with sequence similarity 163 member B)

Identity

Alias_namesC9orf166
chromosome 9 open reading frame 166
family with sequence similarity 163, member B
Other alias
HGNC (Hugo) FAM163B
LocusID (NCBI) 642968
Atlas_Id 63058
Location 9q34.2  [Link to chromosome band 9q34]
Location_base_pair Starts at 133578415 and ends at 133580246 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM163B   33277
Cards
Entrez_Gene (NCBI)FAM163B  642968  family with sequence similarity 163 member B
AliasesC9orf166
GeneCards (Weizmann)FAM163B
Ensembl hg19 (Hinxton)ENSG00000196990 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196990 [Gene_View]  chr9:133578415-133580246 [Contig_View]  FAM163B [Vega]
ICGC DataPortalENSG00000196990
TCGA cBioPortalFAM163B
AceView (NCBI)FAM163B
Genatlas (Paris)FAM163B
WikiGenes642968
SOURCE (Princeton)FAM163B
Genetics Home Reference (NIH)FAM163B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM163B  -     chr9:133578415-133580246 -  9q34.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM163B  -     9q34.2   [Description]    (hg19-Feb_2009)
EnsemblFAM163B - 9q34.2 [CytoView hg19]  FAM163B - 9q34.2 [CytoView hg38]
Mapping of homologs : NCBIFAM163B [Mapview hg19]  FAM163B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL834342 BC146946 BC146961 BC152887 BC156625
RefSeq transcript (Entrez)NM_001080515
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM163B
Cluster EST : UnigeneHs.741379 [ NCBI ]
CGAP (NCI)Hs.741379
Alternative Splicing GalleryENSG00000196990
Gene ExpressionFAM163B [ NCBI-GEO ]   FAM163B [ EBI - ARRAY_EXPRESS ]   FAM163B [ SEEK ]   FAM163B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM163B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642968
GTEX Portal (Tissue expression)FAM163B
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C2L3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C2L3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C2L3
Splice isoforms : SwissVarP0C2L3
PhosPhoSitePlusP0C2L3
Domains : Interpro (EBI)FAM163   
Domain families : Pfam (Sanger)FAM163 (PF15069)   
Domain families : Pfam (NCBI)pfam15069   
Conserved Domain (NCBI)FAM163B
DMDM Disease mutations642968
Blocks (Seattle)FAM163B
SuperfamilyP0C2L3
Human Protein AtlasENSG00000196990
Peptide AtlasP0C2L3
IPIIPI00478696   
Protein Interaction databases
DIP (DOE-UCLA)P0C2L3
IntAct (EBI)P0C2L3
FunCoupENSG00000196990
BioGRIDFAM163B
STRING (EMBL)FAM163B
ZODIACFAM163B
Ontologies - Pathways
QuickGOP0C2L3
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkFAM163B
Atlas of Cancer Signalling NetworkFAM163B
Wikipedia pathwaysFAM163B
Orthology - Evolution
OrthoDB642968
GeneTree (enSembl)ENSG00000196990
Phylogenetic Trees/Animal Genes : TreeFamFAM163B
HOVERGENP0C2L3
HOGENOMP0C2L3
Homologs : HomoloGeneFAM163B
Homology/Alignments : Family Browser (UCSC)FAM163B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM163B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM163B
dbVarFAM163B
ClinVarFAM163B
1000_GenomesFAM163B 
Exome Variant ServerFAM163B
ExAC (Exome Aggregation Consortium)FAM163B (select the gene name)
Genetic variants : HAPMAP642968
Genomic Variants (DGV)FAM163B [DGVbeta]
DECIPHERFAM163B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM163B 
Mutations
ICGC Data PortalFAM163B 
TCGA Data PortalFAM163B 
Broad Tumor PortalFAM163B
OASIS PortalFAM163B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM163B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM163B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM163B
DgiDB (Drug Gene Interaction Database)FAM163B
DoCM (Curated mutations)FAM163B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM163B (select a term)
intoGenFAM163B
Cancer3DFAM163B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM163B
Genetic Testing Registry FAM163B
NextProtP0C2L3 [Medical]
TSGene642968
GENETestsFAM163B
Target ValidationFAM163B
Huge Navigator FAM163B [HugePedia]
snp3D : Map Gene to Disease642968
BioCentury BCIQFAM163B
ClinGenFAM163B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642968
Chemical/Pharm GKB GenePA162386945
Clinical trialFAM163B
Miscellaneous
canSAR (ICR)FAM163B (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM163B
EVEXFAM163B
GoPubMedFAM163B
iHOPFAM163B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:47:56 CEST 2017

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