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FAM167B (family with sequence similarity 167 member B)

Identity

Alias_namesC1orf90
chromosome 1 open reading frame 90
family with sequence similarity 167, member B
Alias_symbol (synonym)MGC10820
Other alias
HGNC (Hugo) FAM167B
LocusID (NCBI) 84734
Atlas_Id 63062
Location 1p35.2  [Link to chromosome band 1p35]
Location_base_pair Starts at 32247217 and ends at 32248860 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM167B   28133
Cards
Entrez_Gene (NCBI)FAM167B  84734  family with sequence similarity 167 member B
AliasesC1orf90
GeneCards (Weizmann)FAM167B
Ensembl hg19 (Hinxton)ENSG00000183615 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183615 [Gene_View]  chr1:32247217-32248860 [Contig_View]  FAM167B [Vega]
ICGC DataPortalENSG00000183615
TCGA cBioPortalFAM167B
AceView (NCBI)FAM167B
Genatlas (Paris)FAM167B
WikiGenes84734
SOURCE (Princeton)FAM167B
Genetics Home Reference (NIH)FAM167B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM167B  -     chr1:32247217-32248860 +  1p35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM167B  -     1p35.2   [Description]    (hg19-Feb_2009)
EnsemblFAM167B - 1p35.2 [CytoView hg19]  FAM167B - 1p35.2 [CytoView hg38]
Mapping of homologs : NCBIFAM167B [Mapview hg19]  FAM167B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC004269 BG282224 BX091465
RefSeq transcript (Entrez)NM_032648
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM167B
Cluster EST : UnigeneHs.18449 [ NCBI ]
CGAP (NCI)Hs.18449
Alternative Splicing GalleryENSG00000183615
Gene ExpressionFAM167B [ NCBI-GEO ]   FAM167B [ EBI - ARRAY_EXPRESS ]   FAM167B [ SEEK ]   FAM167B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM167B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84734
GTEX Portal (Tissue expression)FAM167B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTA0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTA0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTA0
Splice isoforms : SwissVarQ9BTA0
PhosPhoSitePlusQ9BTA0
Domains : Interpro (EBI)FAM167   
Domain families : Pfam (Sanger)FAM167 (PF11652)   
Domain families : Pfam (NCBI)pfam11652   
Conserved Domain (NCBI)FAM167B
DMDM Disease mutations84734
Blocks (Seattle)FAM167B
SuperfamilyQ9BTA0
Human Protein AtlasENSG00000183615
Peptide AtlasQ9BTA0
HPRD14401
IPIIPI00013325   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTA0
IntAct (EBI)Q9BTA0
FunCoupENSG00000183615
BioGRIDFAM167B
STRING (EMBL)FAM167B
ZODIACFAM167B
Ontologies - Pathways
QuickGOQ9BTA0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM167B
Atlas of Cancer Signalling NetworkFAM167B
Wikipedia pathwaysFAM167B
Orthology - Evolution
OrthoDB84734
GeneTree (enSembl)ENSG00000183615
Phylogenetic Trees/Animal Genes : TreeFamFAM167B
HOVERGENQ9BTA0
HOGENOMQ9BTA0
Homologs : HomoloGeneFAM167B
Homology/Alignments : Family Browser (UCSC)FAM167B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM167B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM167B
dbVarFAM167B
ClinVarFAM167B
1000_GenomesFAM167B 
Exome Variant ServerFAM167B
ExAC (Exome Aggregation Consortium)FAM167B (select the gene name)
Genetic variants : HAPMAP84734
Genomic Variants (DGV)FAM167B [DGVbeta]
DECIPHERFAM167B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM167B 
Mutations
ICGC Data PortalFAM167B 
TCGA Data PortalFAM167B 
Broad Tumor PortalFAM167B
OASIS PortalFAM167B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM167B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM167B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM167B
DgiDB (Drug Gene Interaction Database)FAM167B
DoCM (Curated mutations)FAM167B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM167B (select a term)
intoGenFAM167B
Cancer3DFAM167B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM167B
Genetic Testing Registry FAM167B
NextProtQ9BTA0 [Medical]
TSGene84734
GENETestsFAM167B
Target ValidationFAM167B
Huge Navigator FAM167B [HugePedia]
snp3D : Map Gene to Disease84734
BioCentury BCIQFAM167B
ClinGenFAM167B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84734
Chemical/Pharm GKB GenePA162387068
Clinical trialFAM167B
Miscellaneous
canSAR (ICR)FAM167B (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM167B
EVEXFAM167B
GoPubMedFAM167B
iHOPFAM167B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:47:57 CEST 2017

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