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FAM168A (family with sequence similarity 168 member A)

Identity

Alias (NCBI)KIAA0280
TCRP1
HGNC (Hugo) FAM168A
HGNC Alias symbTCRP1
HGNC Alias nametongue cancer chemotherapy resistance-associated protein 1
HGNC Previous nameKIAA0280
HGNC Previous nameKIAA0280
 family with sequence similarity 168, member A
LocusID (NCBI) 23201
Atlas_Id 52609
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 73400487 and ends at 73598112 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAM168A (11q13.4) / C2CD3 (11q13.4)FAM168A (11q13.4) / DNAJB13 (11q13.4)FAM168A (11q13.4) / EMSY (11q13.5)
FAM168A (11q13.4) / PTCRA (6p21.1)FAM168A (11q13.4) / PXDNL (8q11.22)FAM168A (11q13.4) / RAB6A (11q13.4)
FAM168A (11q13.4) / SLC13A2 (17q11.2)FAM168A (11q13.4) / UVRAG (11q13.5)FCHSD2 (11q13.4) / FAM168A (11q13.4)
MARK2 (11q13.1) / FAM168A (11q13.4)MRPL21 (11q13.3) / FAM168A (11q13.4)SOX10 (22q13.1) / FAM168A (11q13.4)
UVRAG (11q13.5) / FAM168A (11q13.4)XRRA1 (11q13.4) / FAM168A (11q13.4)FAM168A 11q13.4 / C2CD3 11q13.4
FAM168A 11q13.4 / DNAJB13 11q13.4FAM168A 11q13.4 / PTCRA 6p21.1FAM168A 11q13.4 / PXDNL 8q11.22
FAM168A 11q13.4 / RAB6A 11q13.4FAM168A 11q13.4 / SLC13A2 17q11.2FAM168A 11q13.4 / UVRAG 11q13.5
FCHSD2 11q13.4 / FAM168A 11q13.4MARK2 11q13.1 / FAM168A 11q13.4MRPL21 11q13.3 / FAM168A 11q13.4
SOX10 22q13.1 / FAM168A 11q13.4UVRAG 11q13.5 / FAM168A 11q13.4XRRA1 11q13.4 / FAM168A 11q13.4

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)FAM168A   28999
Cards
Entrez_Gene (NCBI)FAM168A    family with sequence similarity 168 member A
AliasesKIAA0280; TCRP1
GeneCards (Weizmann)FAM168A
Ensembl hg19 (Hinxton)ENSG00000054965 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000054965 [Gene_View]  ENSG00000054965 [Sequence]  chr11:73400487-73598112 [Contig_View]  FAM168A [Vega]
ICGC DataPortalENSG00000054965
TCGA cBioPortalFAM168A
AceView (NCBI)FAM168A
Genatlas (Paris)FAM168A
SOURCE (Princeton)FAM168A
Genetics Home Reference (NIH)FAM168A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM168A  -     chr11:73400487-73598112 -  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM168A  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathFAM168A - 11q13.4 [CytoView hg19]  FAM168A - 11q13.4 [CytoView hg38]
ImmunoBaseENSG00000054965
Genome Data Viewer NCBIFAM168A [Mapview hg19]  
OMIM616316   
Gene and transcription
Genbank (Entrez)AK292054 BC014932 BC052341 D87470 DB074440
RefSeq transcript (Entrez)NM_001286050 NM_001286051 NM_015159
Consensus coding sequences : CCDS (NCBI)FAM168A
Gene ExpressionFAM168A [ NCBI-GEO ]   FAM168A [ EBI - ARRAY_EXPRESS ]   FAM168A [ SEEK ]   FAM168A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM168A [ Firebrowse - Broad ]
GenevisibleExpression of FAM168A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23201
GTEX Portal (Tissue expression)FAM168A
Human Protein AtlasENSG00000054965-FAM168A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92567   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ92567  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ92567
PhosPhoSitePlusQ92567
Domains : Interpro (EBI)FAM168A/MANI   
Domain families : Pfam (Sanger)TCRP1 (PF14944)   
Domain families : Pfam (NCBI)pfam14944   
Conserved Domain (NCBI)FAM168A
SuperfamilyQ92567
AlphaFold pdb e-kbQ92567   
Human Protein Atlas [tissue]ENSG00000054965-FAM168A [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q92567
IntAct (EBI)Q92567
BioGRIDFAM168A
STRING (EMBL)FAM168A
ZODIACFAM168A
Ontologies - Pathways
QuickGOQ92567
Ontology : AmiGOprotein binding  positive regulation of base-excision repair  positive regulation of base-excision repair  
Ontology : EGO-EBIprotein binding  positive regulation of base-excision repair  positive regulation of base-excision repair  
NDEx NetworkFAM168A
Atlas of Cancer Signalling NetworkFAM168A
Wikipedia pathwaysFAM168A
Orthology - Evolution
OrthoDB23201
GeneTree (enSembl)ENSG00000054965
Phylogenetic Trees/Animal Genes : TreeFamFAM168A
Homologs : HomoloGeneFAM168A
Homology/Alignments : Family Browser (UCSC)FAM168A
Gene fusions - Rearrangements
Fusion : MitelmanFAM168A/C2CD3 [11q13.4/11q13.4]  
Fusion : MitelmanFAM168A/DNAJB13 [11q13.4/11q13.4]  
Fusion : MitelmanFAM168A/PTCRA [11q13.4/6p21.1]  
Fusion : MitelmanFAM168A/PXDNL [11q13.4/8q11.22]  
Fusion : MitelmanFAM168A/RAB6A [11q13.4/11q13.4]  
Fusion : MitelmanFAM168A/SLC13A2 [11q13.4/17q11.2]  
Fusion : MitelmanFAM168A/UVRAG [11q13.4/11q13.5]  
Fusion : MitelmanFCHSD2/FAM168A [11q13.4/11q13.4]  
Fusion : MitelmanMARK2/FAM168A [11q13.1/11q13.4]  
Fusion : MitelmanMRPL21/FAM168A [11q13.3/11q13.4]  
Fusion : MitelmanSOX10/FAM168A [22q13.1/11q13.4]  
Fusion : MitelmanUVRAG/FAM168A [11q13.5/11q13.4]  
Fusion : MitelmanXRRA1/FAM168A [11q13.4/11q13.4]  
Fusion : QuiverFAM168A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM168A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM168A
dbVarFAM168A
ClinVarFAM168A
MonarchFAM168A
1000_GenomesFAM168A 
Exome Variant ServerFAM168A
GNOMAD BrowserENSG00000054965
Varsome BrowserFAM168A
ACMGFAM168A variants
VarityQ92567
Genomic Variants (DGV)FAM168A [DGVbeta]
DECIPHERFAM168A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM168A 
Mutations
ICGC Data PortalFAM168A 
TCGA Data PortalFAM168A 
Broad Tumor PortalFAM168A
OASIS PortalFAM168A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM168A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFAM168A
Mutations and Diseases : HGMDFAM168A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFAM168A
DgiDB (Drug Gene Interaction Database)FAM168A
DoCM (Curated mutations)FAM168A
CIViC (Clinical Interpretations of Variants in Cancer)FAM168A
Cancer3DFAM168A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616316   
Orphanet
DisGeNETFAM168A
MedgenFAM168A
Genetic Testing Registry FAM168A
NextProtQ92567 [Medical]
GENETestsFAM168A
Target ValidationFAM168A
Huge Navigator FAM168A [HugePedia]
ClinGenFAM168A
Clinical trials, drugs, therapy
MyCancerGenomeFAM168A
Protein Interactions : CTDFAM168A
Pharm GKB GenePA162387077
PharosQ92567
Clinical trialFAM168A
Miscellaneous
canSAR (ICR)FAM168A
HarmonizomeFAM168A
DataMed IndexFAM168A
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFAM168A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:08:52 CEST 2021

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