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FAM168B (family with sequence similarity 168 member B)

Identity

Alias_namesfamily with sequence similarity 168, member B
Alias_symbol (synonym)KIAA0280L
MANI
Other alias
HGNC (Hugo) FAM168B
LocusID (NCBI) 130074
Atlas_Id 63063
Location 2q21.1  [Link to chromosome band 2q21]
Location_base_pair Starts at 131047876 and ends at 131093460 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AXL (19q13.2) / FAM168B (2q21.1)CD164 (6q21) / FAM168B (2q21.1)FAM168B (2q21.1) / FAM107B (10p13)
FAM168B (2q21.1) / FAM168B (2q21.1)FAM168B (2q21.1) / NDST1 (5q33.1)FAM168B (2q21.1) / TCF7L2 (10q25.2)
MAD2L1 (4q27) / FAM168B (2q21.1)PLEKHB2 (2q21.1) / FAM168B (2q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM168B   27016
Cards
Entrez_Gene (NCBI)FAM168B  130074  family with sequence similarity 168 member B
AliasesMANI
GeneCards (Weizmann)FAM168B
Ensembl hg19 (Hinxton)ENSG00000152102 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152102 [Gene_View]  chr2:131047876-131093460 [Contig_View]  FAM168B [Vega]
ICGC DataPortalENSG00000152102
TCGA cBioPortalFAM168B
AceView (NCBI)FAM168B
Genatlas (Paris)FAM168B
WikiGenes130074
SOURCE (Princeton)FAM168B
Genetics Home Reference (NIH)FAM168B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM168B  -     chr2:131047876-131093460 -  2q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM168B  -     2q21.1   [Description]    (hg19-Feb_2009)
EnsemblFAM168B - 2q21.1 [CytoView hg19]  FAM168B - 2q21.1 [CytoView hg38]
Mapping of homologs : NCBIFAM168B [Mapview hg19]  FAM168B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022529 AK023868 AL137406 AL137413 AL833819
RefSeq transcript (Entrez)NM_001009993 NM_001321743 NM_001321744 NM_001321745 NM_001321746 NM_001321747 NM_001321748
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM168B
Cluster EST : UnigeneHs.534679 [ NCBI ]
CGAP (NCI)Hs.534679
Alternative Splicing GalleryENSG00000152102
Gene ExpressionFAM168B [ NCBI-GEO ]   FAM168B [ EBI - ARRAY_EXPRESS ]   FAM168B [ SEEK ]   FAM168B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM168B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)130074
GTEX Portal (Tissue expression)FAM168B
Human Protein AtlasENSG00000152102-FAM168B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1KXE4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1KXE4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1KXE4
Splice isoforms : SwissVarA1KXE4
PhosPhoSitePlusA1KXE4
Domains : Interpro (EBI)FAM168A/MANI   
Domain families : Pfam (Sanger)TCRP1 (PF14944)   
Domain families : Pfam (NCBI)pfam14944   
Conserved Domain (NCBI)FAM168B
DMDM Disease mutations130074
Blocks (Seattle)FAM168B
SuperfamilyA1KXE4
Human Protein Atlas [tissue]ENSG00000152102-FAM168B [tissue]
Peptide AtlasA1KXE4
HPRD17295
IPIIPI00556592   IPI00434875   IPI00964731   IPI00982966   IPI00982401   
Protein Interaction databases
DIP (DOE-UCLA)A1KXE4
IntAct (EBI)A1KXE4
FunCoupENSG00000152102
BioGRIDFAM168B
STRING (EMBL)FAM168B
ZODIACFAM168B
Ontologies - Pathways
QuickGOA1KXE4
Ontology : AmiGOplasma membrane  integral component of membrane  axon  perinuclear region of cytoplasm  extracellular exosome  
Ontology : EGO-EBIplasma membrane  integral component of membrane  axon  perinuclear region of cytoplasm  extracellular exosome  
NDEx NetworkFAM168B
Atlas of Cancer Signalling NetworkFAM168B
Wikipedia pathwaysFAM168B
Orthology - Evolution
OrthoDB130074
GeneTree (enSembl)ENSG00000152102
Phylogenetic Trees/Animal Genes : TreeFamFAM168B
HOVERGENA1KXE4
HOGENOMA1KXE4
Homologs : HomoloGeneFAM168B
Homology/Alignments : Family Browser (UCSC)FAM168B
Gene fusions - Rearrangements
Tumor Fusion PortalFAM168B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM168B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM168B
dbVarFAM168B
ClinVarFAM168B
1000_GenomesFAM168B 
Exome Variant ServerFAM168B
ExAC (Exome Aggregation Consortium)ENSG00000152102
GNOMAD BrowserENSG00000152102
Genetic variants : HAPMAP130074
Genomic Variants (DGV)FAM168B [DGVbeta]
DECIPHERFAM168B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM168B 
Mutations
ICGC Data PortalFAM168B 
TCGA Data PortalFAM168B 
Broad Tumor PortalFAM168B
OASIS PortalFAM168B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM168B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM168B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM168B
DgiDB (Drug Gene Interaction Database)FAM168B
DoCM (Curated mutations)FAM168B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM168B (select a term)
intoGenFAM168B
Cancer3DFAM168B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM168B
MedgenFAM168B
Genetic Testing Registry FAM168B
NextProtA1KXE4 [Medical]
TSGene130074
GENETestsFAM168B
Target ValidationFAM168B
Huge Navigator FAM168B [HugePedia]
snp3D : Map Gene to Disease130074
BioCentury BCIQFAM168B
ClinGenFAM168B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD130074
Chemical/Pharm GKB GenePA162387098
Clinical trialFAM168B
Miscellaneous
canSAR (ICR)FAM168B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM168B
EVEXFAM168B
GoPubMedFAM168B
iHOPFAM168B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:04:30 CET 2017

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