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FAM169A (family with sequence similarity 169 member A)

Identity

Alias (NCBI)SLAP75
HGNC (Hugo) FAM169A
HGNC Alias symbKIAA0888
HGNC Previous namefamily with sequence similarity 169, member A
LocusID (NCBI) 26049
Atlas_Id 63064
Location 5q13.3  [Link to chromosome band 5q13]
Location_base_pair Starts at 74777574 and ends at 74866966 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAM169A (5q13.3)::ANKRD31 (5q13.3)TNFSF4 (1q25.1)::FAM169A (5q13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)FAM169A   29138
Cards
Entrez_Gene (NCBI)FAM169A    family with sequence similarity 169 member A
AliasesSLAP75
GeneCards (Weizmann)FAM169A
Ensembl hg19 (Hinxton)ENSG00000198780 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198780 [Gene_View]  ENSG00000198780 [Sequence]  chr5:74777574-74866966 [Contig_View]  FAM169A [Vega]
ICGC DataPortalENSG00000198780
TCGA cBioPortalFAM169A
AceView (NCBI)FAM169A
Genatlas (Paris)FAM169A
SOURCE (Princeton)FAM169A
Genetics Home Reference (NIH)FAM169A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM169A  -     chr5:74777574-74866966 -  5q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM169A  -     5q13.3   [Description]    (hg19-Feb_2009)
GoldenPathFAM169A - 5q13.3 [CytoView hg19]  FAM169A - 5q13.3 [CytoView hg38]
ImmunoBaseENSG00000198780
Genome Data Viewer NCBIFAM169A [Mapview hg19]  
OMIM615769   
Gene and transcription
Genbank (Entrez)AB020695 AK022981 AK290004 BC040298 BC044766
RefSeq transcript (Entrez)NM_001376049 NM_001376050 NM_001376051 NM_001376052 NM_001376053 NM_001376054 NM_015566
Consensus coding sequences : CCDS (NCBI)FAM169A
Gene ExpressionFAM169A [ NCBI-GEO ]   FAM169A [ EBI - ARRAY_EXPRESS ]   FAM169A [ SEEK ]   FAM169A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM169A [ Firebrowse - Broad ]
GenevisibleExpression of FAM169A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26049
GTEX Portal (Tissue expression)FAM169A
Human Protein AtlasENSG00000198780-FAM169A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y6X4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y6X4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y6X4
PhosPhoSitePlusQ9Y6X4
Domains : Interpro (EBI)FAM169    FAM169A   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM169A
SuperfamilyQ9Y6X4
AlphaFold pdb e-kbQ9Y6X4   
Human Protein Atlas [tissue]ENSG00000198780-FAM169A [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9Y6X4
IntAct (EBI)Q9Y6X4
BioGRIDFAM169A
STRING (EMBL)FAM169A
ZODIACFAM169A
Ontologies - Pathways
QuickGOQ9Y6X4
Ontology : AmiGOprotein binding  nuclear inner membrane  
Ontology : EGO-EBIprotein binding  nuclear inner membrane  
NDEx NetworkFAM169A
Atlas of Cancer Signalling NetworkFAM169A
Wikipedia pathwaysFAM169A
Orthology - Evolution
OrthoDB26049
GeneTree (enSembl)ENSG00000198780
Phylogenetic Trees/Animal Genes : TreeFamFAM169A
Homologs : HomoloGeneFAM169A
Homology/Alignments : Family Browser (UCSC)FAM169A
Gene fusions - Rearrangements
Fusion : QuiverFAM169A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM169A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM169A
dbVarFAM169A
ClinVarFAM169A
MonarchFAM169A
1000_GenomesFAM169A 
Exome Variant ServerFAM169A
GNOMAD BrowserENSG00000198780
Varsome BrowserFAM169A
ACMGFAM169A variants
VarityQ9Y6X4
Genomic Variants (DGV)FAM169A [DGVbeta]
DECIPHERFAM169A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM169A 
Mutations
ICGC Data PortalFAM169A 
TCGA Data PortalFAM169A 
Broad Tumor PortalFAM169A
OASIS PortalFAM169A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM169A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFAM169A
Mutations and Diseases : HGMDFAM169A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFAM169A
DgiDB (Drug Gene Interaction Database)FAM169A
DoCM (Curated mutations)FAM169A
CIViC (Clinical Interpretations of Variants in Cancer)FAM169A
Cancer3DFAM169A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615769   
Orphanet
DisGeNETFAM169A
MedgenFAM169A
Genetic Testing Registry FAM169A
NextProtQ9Y6X4 [Medical]
GENETestsFAM169A
Target ValidationFAM169A
Huge Navigator FAM169A [HugePedia]
ClinGenFAM169A
Clinical trials, drugs, therapy
MyCancerGenomeFAM169A
Protein Interactions : CTDFAM169A
Pharm GKB GenePA162387117
PharosQ9Y6X4
Clinical trialFAM169A
Miscellaneous
canSAR (ICR)FAM169A
HarmonizomeFAM169A
ARCHS4FAM169A
DataMed IndexFAM169A
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFAM169A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 18:52:23 CET 2022

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