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FAM169B (family with sequence similarity 169 member B)

Identity

Alias_namesfamily with sequence similarity 169, member B
Alias_symbol (synonym)FLJ39743
KIAA0888L
Other alias-
HGNC (Hugo) FAM169B
LocusID (NCBI) 283777
Atlas_Id 63065
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 98437162 and ends at 98514382 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM214A (15q21.2) / FAM169B (15q26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM169B   26835
Cards
Entrez_Gene (NCBI)FAM169B  283777  family with sequence similarity 169 member B
Aliases
GeneCards (Weizmann)FAM169B
Ensembl hg19 (Hinxton)ENSG00000185087 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185087 [Gene_View]  chr15:98437162-98514382 [Contig_View]  FAM169B [Vega]
ICGC DataPortalENSG00000185087
TCGA cBioPortalFAM169B
AceView (NCBI)FAM169B
Genatlas (Paris)FAM169B
WikiGenes283777
SOURCE (Princeton)FAM169B
Genetics Home Reference (NIH)FAM169B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM169B  -     chr15:98437162-98514382 -  15q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM169B  -     15q26.3   [Description]    (hg19-Feb_2009)
EnsemblFAM169B - 15q26.3 [CytoView hg19]  FAM169B - 15q26.3 [CytoView hg38]
Mapping of homologs : NCBIFAM169B [Mapview hg19]  FAM169B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097062 BC146358 BC148843
RefSeq transcript (Entrez)NM_182562
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM169B
Cluster EST : UnigeneHs.668070 [ NCBI ]
CGAP (NCI)Hs.668070
Alternative Splicing GalleryENSG00000185087
Gene ExpressionFAM169B [ NCBI-GEO ]   FAM169B [ EBI - ARRAY_EXPRESS ]   FAM169B [ SEEK ]   FAM169B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM169B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283777
GTEX Portal (Tissue expression)FAM169B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8A8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8A8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8A8
Splice isoforms : SwissVarQ8N8A8
PhosPhoSitePlusQ8N8A8
Domains : Interpro (EBI)FAM169    FAM169B   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM169B
DMDM Disease mutations283777
Blocks (Seattle)FAM169B
SuperfamilyQ8N8A8
Human Protein AtlasENSG00000185087
Peptide AtlasQ8N8A8
HPRD08265
IPIIPI00298106   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8A8
IntAct (EBI)Q8N8A8
FunCoupENSG00000185087
BioGRIDFAM169B
STRING (EMBL)FAM169B
ZODIACFAM169B
Ontologies - Pathways
QuickGOQ8N8A8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM169B
Atlas of Cancer Signalling NetworkFAM169B
Wikipedia pathwaysFAM169B
Orthology - Evolution
OrthoDB283777
GeneTree (enSembl)ENSG00000185087
Phylogenetic Trees/Animal Genes : TreeFamFAM169B
HOVERGENQ8N8A8
HOGENOMQ8N8A8
Homologs : HomoloGeneFAM169B
Homology/Alignments : Family Browser (UCSC)FAM169B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM169B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM169B
dbVarFAM169B
ClinVarFAM169B
1000_GenomesFAM169B 
Exome Variant ServerFAM169B
ExAC (Exome Aggregation Consortium)FAM169B (select the gene name)
Genetic variants : HAPMAP283777
Genomic Variants (DGV)FAM169B [DGVbeta]
DECIPHERFAM169B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM169B 
Mutations
ICGC Data PortalFAM169B 
TCGA Data PortalFAM169B 
Broad Tumor PortalFAM169B
OASIS PortalFAM169B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM169B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM169B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM169B
DgiDB (Drug Gene Interaction Database)FAM169B
DoCM (Curated mutations)FAM169B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM169B (select a term)
intoGenFAM169B
Cancer3DFAM169B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM169B
Genetic Testing Registry FAM169B
NextProtQ8N8A8 [Medical]
TSGene283777
GENETestsFAM169B
Target ValidationFAM169B
Huge Navigator FAM169B [HugePedia]
snp3D : Map Gene to Disease283777
BioCentury BCIQFAM169B
ClinGenFAM169B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283777
Chemical/Pharm GKB GenePA162387148
Clinical trialFAM169B
Miscellaneous
canSAR (ICR)FAM169B (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM169B
EVEXFAM169B
GoPubMedFAM169B
iHOPFAM169B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:41 CEST 2017

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