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FAM174A (family with sequence similarity 174, member A)

Identity

Alias_namesTMEM157
transmembrane protein 157
family with sequence similarity 174, member A
Alias_symbol (synonym)UNQ1912
Other aliasHGS_RE408
HGNC (Hugo) FAM174A
LocusID (NCBI) 345757
Atlas_Id 63073
Location 5q21.1  [Link to chromosome band 5q21]
Location_base_pair Starts at 99871009 and ends at 99922444 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
HDLBP (2q37.3) / FAM174A (5q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM174A   24943
Cards
Entrez_Gene (NCBI)FAM174A  345757  family with sequence similarity 174, member A
AliasesHGS_RE408; TMEM157; UNQ1912
GeneCards (Weizmann)FAM174A
Ensembl hg19 (Hinxton)ENSG00000174132 [Gene_View]  chr5:99871009-99922444 [Contig_View]  FAM174A [Vega]
Ensembl hg38 (Hinxton)ENSG00000174132 [Gene_View]  chr5:99871009-99922444 [Contig_View]  FAM174A [Vega]
ICGC DataPortalENSG00000174132
TCGA cBioPortalFAM174A
AceView (NCBI)FAM174A
Genatlas (Paris)FAM174A
WikiGenes345757
SOURCE (Princeton)FAM174A
Genetics Home Reference (NIH)FAM174A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM174A  -     chr5:99871009-99922444 +  5q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM174A  -     5q21.1   [Description]    (hg38-Dec_2013)
EnsemblFAM174A - 5q21.1 [CytoView hg19]  FAM174A - 5q21.1 [CytoView hg38]
Mapping of homologs : NCBIFAM174A [Mapview hg19]  FAM174A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF529367 AK289539 AY359108 BC027332 BI462478
RefSeq transcript (Entrez)NM_198507
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)FAM174A
Cluster EST : UnigeneHs.356108 [ NCBI ]
CGAP (NCI)Hs.356108
Alternative Splicing GalleryENSG00000174132
Gene ExpressionFAM174A [ NCBI-GEO ]   FAM174A [ EBI - ARRAY_EXPRESS ]   FAM174A [ SEEK ]   FAM174A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM174A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)345757
GTEX Portal (Tissue expression)FAM174A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBP5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TBP5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TBP5
Splice isoforms : SwissVarQ8TBP5
PhosPhoSitePlusQ8TBP5
Domains : Interpro (EBI)DUF1180   
Domain families : Pfam (Sanger)DUF1180 (PF06679)   
Domain families : Pfam (NCBI)pfam06679   
Conserved Domain (NCBI)FAM174A
DMDM Disease mutations345757
Blocks (Seattle)FAM174A
SuperfamilyQ8TBP5
Human Protein AtlasENSG00000174132
Peptide AtlasQ8TBP5
HPRD18260
IPIIPI00290826   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBP5
IntAct (EBI)Q8TBP5
FunCoupENSG00000174132
BioGRIDFAM174A
STRING (EMBL)FAM174A
ZODIACFAM174A
Ontologies - Pathways
QuickGOQ8TBP5
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkFAM174A
Atlas of Cancer Signalling NetworkFAM174A
Wikipedia pathwaysFAM174A
Orthology - Evolution
OrthoDB345757
GeneTree (enSembl)ENSG00000174132
Phylogenetic Trees/Animal Genes : TreeFamFAM174A
HOVERGENQ8TBP5
HOGENOMQ8TBP5
Homologs : HomoloGeneFAM174A
Homology/Alignments : Family Browser (UCSC)FAM174A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM174A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM174A
dbVarFAM174A
ClinVarFAM174A
1000_GenomesFAM174A 
Exome Variant ServerFAM174A
ExAC (Exome Aggregation Consortium)FAM174A (select the gene name)
Genetic variants : HAPMAP345757
Genomic Variants (DGV)FAM174A [DGVbeta]
DECIPHER (Syndromes)5:99871009-99922444  ENSG00000174132
CONAN: Copy Number AnalysisFAM174A 
Mutations
ICGC Data PortalFAM174A 
TCGA Data PortalFAM174A 
Broad Tumor PortalFAM174A
OASIS PortalFAM174A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM174A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM174A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM174A
DgiDB (Drug Gene Interaction Database)FAM174A
DoCM (Curated mutations)FAM174A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM174A (select a term)
intoGenFAM174A
Cancer3DFAM174A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM174A
Genetic Testing Registry FAM174A
NextProtQ8TBP5 [Medical]
TSGene345757
GENETestsFAM174A
Huge Navigator FAM174A [HugePedia]
snp3D : Map Gene to Disease345757
BioCentury BCIQFAM174A
ClinGenFAM174A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD345757
Chemical/Pharm GKB GenePA162387296
Clinical trialFAM174A
Miscellaneous
canSAR (ICR)FAM174A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM174A
EVEXFAM174A
GoPubMedFAM174A
iHOPFAM174A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:40 CET 2017

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