Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM181B (family with sequence similarity 181 member B)

Identity

Alias_namesfamily with sequence similarity 181, member B
Alias_symbol (synonym)LOC220382
MGC33846
Other alias-
HGNC (Hugo) FAM181B
LocusID (NCBI) 220382
Atlas_Id 63086
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 82732004 and ends at 82733864 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)FAM181B   28512
Cards
Entrez_Gene (NCBI)FAM181B  220382  family with sequence similarity 181 member B
Aliases
GeneCards (Weizmann)FAM181B
Ensembl hg19 (Hinxton)ENSG00000182103 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182103 [Gene_View]  ENSG00000182103 [Sequence]  chr11:82732004-82733864 [Contig_View]  FAM181B [Vega]
ICGC DataPortalENSG00000182103
TCGA cBioPortalFAM181B
AceView (NCBI)FAM181B
Genatlas (Paris)FAM181B
WikiGenes220382
SOURCE (Princeton)FAM181B
Genetics Home Reference (NIH)FAM181B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM181B  -     chr11:82732004-82733864 -  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM181B  -     11q14.1   [Description]    (hg19-Feb_2009)
GoldenPathFAM181B - 11q14.1 [CytoView hg19]  FAM181B - 11q14.1 [CytoView hg38]
ImmunoBaseENSG00000182103
Mapping of homologs : NCBIFAM181B [Mapview hg19]  FAM181B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095054 BC039262 BC150621 BE857184 BE858471
RefSeq transcript (Entrez)NM_175885
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM181B
Cluster EST : UnigeneHs.448218 [ NCBI ]
CGAP (NCI)Hs.448218
Alternative Splicing GalleryENSG00000182103
Gene ExpressionFAM181B [ NCBI-GEO ]   FAM181B [ EBI - ARRAY_EXPRESS ]   FAM181B [ SEEK ]   FAM181B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM181B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)220382
GTEX Portal (Tissue expression)FAM181B
Human Protein AtlasENSG00000182103-FAM181B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NEQ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NEQ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NEQ2
Splice isoforms : SwissVarA6NEQ2
PhosPhoSitePlusA6NEQ2
Domains : Interpro (EBI)FAM181   
Domain families : Pfam (Sanger)FAM181 (PF15238)   
Domain families : Pfam (NCBI)pfam15238   
Conserved Domain (NCBI)FAM181B
DMDM Disease mutations220382
Blocks (Seattle)FAM181B
SuperfamilyA6NEQ2
Human Protein Atlas [tissue]ENSG00000182103-FAM181B [tissue]
Peptide AtlasA6NEQ2
HPRD14575
IPIIPI00217625   
Protein Interaction databases
DIP (DOE-UCLA)A6NEQ2
IntAct (EBI)A6NEQ2
FunCoupENSG00000182103
BioGRIDFAM181B
STRING (EMBL)FAM181B
ZODIACFAM181B
Ontologies - Pathways
QuickGOA6NEQ2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM181B
Atlas of Cancer Signalling NetworkFAM181B
Wikipedia pathwaysFAM181B
Orthology - Evolution
OrthoDB220382
GeneTree (enSembl)ENSG00000182103
Phylogenetic Trees/Animal Genes : TreeFamFAM181B
HOGENOMA6NEQ2
Homologs : HomoloGeneFAM181B
Homology/Alignments : Family Browser (UCSC)FAM181B
Gene fusions - Rearrangements
Fusion : QuiverFAM181B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM181B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM181B
dbVarFAM181B
ClinVarFAM181B
1000_GenomesFAM181B 
Exome Variant ServerFAM181B
ExAC (Exome Aggregation Consortium)ENSG00000182103
GNOMAD BrowserENSG00000182103
Varsome BrowserFAM181B
Genetic variants : HAPMAP220382
Genomic Variants (DGV)FAM181B [DGVbeta]
DECIPHERFAM181B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM181B 
Mutations
ICGC Data PortalFAM181B 
TCGA Data PortalFAM181B 
Broad Tumor PortalFAM181B
OASIS PortalFAM181B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM181B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM181B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM181B
DgiDB (Drug Gene Interaction Database)FAM181B
DoCM (Curated mutations)FAM181B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM181B (select a term)
intoGenFAM181B
Cancer3DFAM181B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM181B
MedgenFAM181B
Genetic Testing Registry FAM181B
NextProtA6NEQ2 [Medical]
TSGene220382
GENETestsFAM181B
Target ValidationFAM181B
Huge Navigator FAM181B [HugePedia]
snp3D : Map Gene to Disease220382
BioCentury BCIQFAM181B
ClinGenFAM181B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD220382
Chemical/Pharm GKB GenePA162387593
Clinical trialFAM181B
Miscellaneous
canSAR (ICR)FAM181B (select the gene name)
DataMed IndexFAM181B
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM181B
EVEXFAM181B
GoPubMedFAM181B
iHOPFAM181B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 7 17:17:12 CEST 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.