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FAM183BP (acyloxyacyl hydrolase (neutrophil))

Identity

Alias_namesFAM183B
family with sequence similarity 183, member B
family with sequence similarity 183, member B, pseudogene
Alias_symbol (synonym)LOC340286
Other aliasTHEG6
HGNC (Hugo) FAM183BP
LocusID (NCBI) 340286
Atlas_Id 78103
Location 7p14.1  [Link to chromosome band 7p14]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM183BP   34511
Cards
Entrez_Gene (NCBI)FAM183BP  340286  acyloxyacyl hydrolase (neutrophil)
AliasesFAM183B; THEG6
GeneCards (Weizmann)FAM183BP
Ensembl hg19 (Hinxton)ENSG00000164556 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164556 [Gene_View]  - [Contig_View]  FAM183BP [Vega]
ICGC DataPortalENSG00000164556
TCGA cBioPortalFAM183BP
AceView (NCBI)FAM183BP
Genatlas (Paris)FAM183BP
WikiGenes340286
SOURCE (Princeton)FAM183BP
Genetics Home Reference (NIH)FAM183BP
Genomic and cartography
GoldenPath hg38 (UCSC)FAM183BP  -  
GoldenPath hg19 (UCSC)FAM183BP  -  
EnsemblFAM183BP - [CytoView hg19]  FAM183BP - [CytoView hg38]
Mapping of homologs : NCBIFAM183BP [Mapview hg19]  FAM183BP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI217903 AK124132 BC045803 BG772121 DB047796
RefSeq transcript (Entrez)NM_001105282
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM183BP
Cluster EST : UnigeneHs.144075 [ NCBI ]
CGAP (NCI)Hs.144075
Alternative Splicing GalleryENSG00000164556
Gene ExpressionFAM183BP [ NCBI-GEO ]   FAM183BP [ EBI - ARRAY_EXPRESS ]   FAM183BP [ SEEK ]   FAM183BP [ MEM ]
Gene Expression Viewer (FireBrowse)FAM183BP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340286
GTEX Portal (Tissue expression)FAM183BP
Human Protein AtlasENSG00000164556-FAM183BP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZVS7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZVS7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZVS7
Splice isoforms : SwissVarQ6ZVS7
PhosPhoSitePlusQ6ZVS7
Domains : Interpro (EBI)FAM183   
Domain families : Pfam (Sanger)FAM183 (PF14886)   
Domain families : Pfam (NCBI)pfam14886   
Conserved Domain (NCBI)FAM183BP
DMDM Disease mutations340286
Blocks (Seattle)FAM183BP
SuperfamilyQ6ZVS7
Human Protein Atlas [tissue]ENSG00000164556-FAM183BP [tissue]
Peptide AtlasQ6ZVS7
IPIIPI00446385   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZVS7
IntAct (EBI)Q6ZVS7
FunCoupENSG00000164556
BioGRIDFAM183BP
STRING (EMBL)FAM183BP
ZODIACFAM183BP
Ontologies - Pathways
QuickGOQ6ZVS7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM183BP
Atlas of Cancer Signalling NetworkFAM183BP
Wikipedia pathwaysFAM183BP
Orthology - Evolution
OrthoDB340286
GeneTree (enSembl)ENSG00000164556
Phylogenetic Trees/Animal Genes : TreeFamFAM183BP
HOVERGENQ6ZVS7
HOGENOMQ6ZVS7
Homologs : HomoloGeneFAM183BP
Homology/Alignments : Family Browser (UCSC)FAM183BP
Gene fusions - Rearrangements
Tumor Fusion PortalFAM183BP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM183BP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM183BP
dbVarFAM183BP
ClinVarFAM183BP
1000_GenomesFAM183BP 
Exome Variant ServerFAM183BP
ExAC (Exome Aggregation Consortium)ENSG00000164556
GNOMAD BrowserENSG00000164556
Genetic variants : HAPMAP340286
Genomic Variants (DGV)FAM183BP [DGVbeta]
DECIPHERFAM183BP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM183BP 
Mutations
ICGC Data PortalFAM183BP 
TCGA Data PortalFAM183BP 
Broad Tumor PortalFAM183BP
OASIS PortalFAM183BP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM183BP
BioMutasearch FAM183BP
DgiDB (Drug Gene Interaction Database)FAM183BP
DoCM (Curated mutations)FAM183BP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM183BP (select a term)
intoGenFAM183BP
Cancer3DFAM183BP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM183BP
MedgenFAM183BP
Genetic Testing Registry FAM183BP
NextProtQ6ZVS7 [Medical]
TSGene340286
GENETestsFAM183BP
Target ValidationFAM183BP
Huge Navigator FAM183BP [HugePedia]
snp3D : Map Gene to Disease340286
BioCentury BCIQFAM183BP
ClinGenFAM183BP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340286
Chemical/Pharm GKB GenePA164719759
Clinical trialFAM183BP
Miscellaneous
canSAR (ICR)FAM183BP (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM183BP
EVEXFAM183BP
GoPubMedFAM183BP
iHOPFAM183BP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:16:03 CET 2017

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