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FAM186A (family with sequence similarity 186, member A)

Identity

Alias_namesfamily with sequence similarity 186, member A
Alias_symbol (synonym)LOC121006
Other alias-
HGNC (Hugo) FAM186A
LocusID (NCBI) 121006
Atlas_Id 63094
Location 12q13.12  [Link to chromosome band 12q13]
Location_base_pair Starts at 50721095 and ends at 50790405 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM186A   26980
Cards
Entrez_Gene (NCBI)FAM186A  121006  family with sequence similarity 186, member A
Aliases
GeneCards (Weizmann)FAM186A
Ensembl hg19 (Hinxton)ENSG00000185958 [Gene_View]  chr12:50721095-50790405 [Contig_View]  FAM186A [Vega]
Ensembl hg38 (Hinxton)ENSG00000185958 [Gene_View]  chr12:50721095-50790405 [Contig_View]  FAM186A [Vega]
ICGC DataPortalENSG00000185958
TCGA cBioPortalFAM186A
AceView (NCBI)FAM186A
Genatlas (Paris)FAM186A
WikiGenes121006
SOURCE (Princeton)FAM186A
Genetics Home Reference (NIH)FAM186A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM186A  -     chr12:50721095-50790405 -  12q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM186A  -     12q13.12   [Description]    (hg38-Dec_2013)
EnsemblFAM186A - 12q13.12 [CytoView hg19]  FAM186A - 12q13.12 [CytoView hg38]
Mapping of homologs : NCBIFAM186A [Mapview hg19]  FAM186A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL833333 BC054024 BC140703
RefSeq transcript (Entrez)NM_001145475
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_029419 NW_004929384
Consensus coding sequences : CCDS (NCBI)FAM186A
Cluster EST : UnigeneHs.133187 [ NCBI ]
CGAP (NCI)Hs.133187
Alternative Splicing GalleryENSG00000185958
Gene ExpressionFAM186A [ NCBI-GEO ]   FAM186A [ EBI - ARRAY_EXPRESS ]   FAM186A [ SEEK ]   FAM186A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM186A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)121006
GTEX Portal (Tissue expression)FAM186A
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NE01   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NE01  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NE01
Splice isoforms : SwissVarA6NE01
PhosPhoSitePlusA6NE01
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM186A
DMDM Disease mutations121006
Blocks (Seattle)FAM186A
SuperfamilyA6NE01
Human Protein AtlasENSG00000185958
Peptide AtlasA6NE01
IPIIPI00241802   IPI00745177   IPI00921455   IPI01013102   
Protein Interaction databases
DIP (DOE-UCLA)A6NE01
IntAct (EBI)A6NE01
FunCoupENSG00000185958
BioGRIDFAM186A
STRING (EMBL)FAM186A
ZODIACFAM186A
Ontologies - Pathways
QuickGOA6NE01
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM186A
Atlas of Cancer Signalling NetworkFAM186A
Wikipedia pathwaysFAM186A
Orthology - Evolution
OrthoDB121006
GeneTree (enSembl)ENSG00000185958
Phylogenetic Trees/Animal Genes : TreeFamFAM186A
HOVERGENA6NE01
HOGENOMA6NE01
Homologs : HomoloGeneFAM186A
Homology/Alignments : Family Browser (UCSC)FAM186A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM186A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM186A
dbVarFAM186A
ClinVarFAM186A
1000_GenomesFAM186A 
Exome Variant ServerFAM186A
ExAC (Exome Aggregation Consortium)FAM186A (select the gene name)
Genetic variants : HAPMAP121006
Genomic Variants (DGV)FAM186A [DGVbeta]
DECIPHER (Syndromes)12:50721095-50790405  ENSG00000185958
CONAN: Copy Number AnalysisFAM186A 
Mutations
ICGC Data PortalFAM186A 
TCGA Data PortalFAM186A 
Broad Tumor PortalFAM186A
OASIS PortalFAM186A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM186A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM186A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM186A
DgiDB (Drug Gene Interaction Database)FAM186A
DoCM (Curated mutations)FAM186A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM186A (select a term)
intoGenFAM186A
Cancer3DFAM186A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM186A
Genetic Testing Registry FAM186A
NextProtA6NE01 [Medical]
TSGene121006
GENETestsFAM186A
Huge Navigator FAM186A [HugePedia]
snp3D : Map Gene to Disease121006
BioCentury BCIQFAM186A
ClinGenFAM186A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD121006
Chemical/Pharm GKB GenePA164719869
Clinical trialFAM186A
Miscellaneous
canSAR (ICR)FAM186A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM186A
EVEXFAM186A
GoPubMedFAM186A
iHOPFAM186A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:45 CET 2017

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