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FAM187A (family with sequence similarity 187, member A)

Identity

Alias_namesfamily with sequence similarity 187, member A
Other alias-
HGNC (Hugo) FAM187A
LocusID (NCBI) 100528020
Atlas_Id 63096
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 42977142 and ends at 42982758 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)FAM187A   35153
Cards
Entrez_Gene (NCBI)FAM187A  100528020  family with sequence similarity 187, member A
Aliases
GeneCards (Weizmann)FAM187A
Ensembl hg19 (Hinxton) [Gene_View]  chr17:42977142-42982758 [Contig_View]  FAM187A [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:42977142-42982758 [Contig_View]  FAM187A [Vega]
TCGA cBioPortalFAM187A
AceView (NCBI)FAM187A
Genatlas (Paris)FAM187A
WikiGenes100528020
SOURCE (Princeton)FAM187A
Genetics Home Reference (NIH)FAM187A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM187A  -     chr17:42977142-42982758 +  17q21.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM187A  -     17q21.31   [Description]    (hg38-Dec_2013)
EnsemblFAM187A - 17q21.31 [CytoView hg19]  FAM187A - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBIFAM187A [Mapview hg19]  FAM187A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023156
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM187A
Cluster EST : UnigeneHs.743398 [ NCBI ]
CGAP (NCI)Hs.743398
Gene ExpressionFAM187A [ NCBI-GEO ]   FAM187A [ EBI - ARRAY_EXPRESS ]   FAM187A [ SEEK ]   FAM187A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM187A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100528020
GTEX Portal (Tissue expression)FAM187A
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NFU0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NFU0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NFU0
Splice isoforms : SwissVarA6NFU0
PhosPhoSitePlusA6NFU0
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)FAM187A
DMDM Disease mutations100528020
Blocks (Seattle)FAM187A
SuperfamilyA6NFU0
Peptide AtlasA6NFU0
IPIIPI00373900   
Protein Interaction databases
DIP (DOE-UCLA)A6NFU0
IntAct (EBI)A6NFU0
BioGRIDFAM187A
STRING (EMBL)FAM187A
ZODIACFAM187A
Ontologies - Pathways
QuickGOA6NFU0
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkFAM187A
Atlas of Cancer Signalling NetworkFAM187A
Wikipedia pathwaysFAM187A
Orthology - Evolution
OrthoDB100528020
Phylogenetic Trees/Animal Genes : TreeFamFAM187A
HOVERGENA6NFU0
HOGENOMA6NFU0
Homologs : HomoloGeneFAM187A
Homology/Alignments : Family Browser (UCSC)FAM187A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM187A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM187A
dbVarFAM187A
ClinVarFAM187A
1000_GenomesFAM187A 
Exome Variant ServerFAM187A
ExAC (Exome Aggregation Consortium)FAM187A (select the gene name)
Genetic variants : HAPMAP100528020
Genomic Variants (DGV)FAM187A [DGVbeta]
DECIPHER (Syndromes)17:42977142-42982758  
CONAN: Copy Number AnalysisFAM187A 
Mutations
ICGC Data PortalFAM187A 
TCGA Data PortalFAM187A 
Broad Tumor PortalFAM187A
OASIS PortalFAM187A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM187A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM187A
BioMutasearch FAM187A
DgiDB (Drug Gene Interaction Database)FAM187A
DoCM (Curated mutations)FAM187A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM187A (select a term)
intoGenFAM187A
Cancer3DFAM187A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM187A
Genetic Testing Registry FAM187A
NextProtA6NFU0 [Medical]
TSGene100528020
GENETestsFAM187A
Huge Navigator FAM187A [HugePedia]
snp3D : Map Gene to Disease100528020
BioCentury BCIQFAM187A
ClinGenFAM187A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100528020
Clinical trialFAM187A
Miscellaneous
canSAR (ICR)FAM187A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM187A
EVEXFAM187A
GoPubMedFAM187A
iHOPFAM187A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:45 CET 2017

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