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FAM195A (family with sequence similarity 195, member A)

Identity

Other aliasC16orf14
c349E10.1
HGNC (Hugo) FAM195A
LocusID (NCBI) 84331
Atlas_Id 63104
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 691849 and ends at 698474 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ABCC1 (16p13.11) / FAM195A (16p13.3)FAM195A (16p13.3) / RAB11FIP3 (16p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM195A   14142
Cards
Entrez_Gene (NCBI)FAM195A  84331  family with sequence similarity 195, member A
AliasesC16orf14; c349E10.1
GeneCards (Weizmann)FAM195A
Ensembl hg19 (Hinxton)ENSG00000172366 [Gene_View]  chr16:691849-698474 [Contig_View]  FAM195A [Vega]
Ensembl hg38 (Hinxton)ENSG00000172366 [Gene_View]  chr16:691849-698474 [Contig_View]  FAM195A [Vega]
ICGC DataPortalENSG00000172366
TCGA cBioPortalFAM195A
AceView (NCBI)FAM195A
Genatlas (Paris)FAM195A
WikiGenes84331
SOURCE (Princeton)FAM195A
Genetics Home Reference (NIH)FAM195A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM195A  -     chr16:691849-698474 +  16p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM195A  -     16p13.3   [Description]    (hg38-Dec_2013)
EnsemblFAM195A - 16p13.3 [CytoView hg19]  FAM195A - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIFAM195A [Mapview hg19]  FAM195A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF386504 AK054811 BC001912 BC007346 BC010562
RefSeq transcript (Entrez)NM_032371 NM_138418
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010393 NW_004929400
Consensus coding sequences : CCDS (NCBI)FAM195A
Cluster EST : UnigeneHs.706105 [ NCBI ]
CGAP (NCI)Hs.706105
Alternative Splicing GalleryENSG00000172366
Gene ExpressionFAM195A [ NCBI-GEO ]   FAM195A [ EBI - ARRAY_EXPRESS ]   FAM195A [ SEEK ]   FAM195A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM195A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84331
GTEX Portal (Tissue expression)FAM195A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BUT9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BUT9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BUT9
Splice isoforms : SwissVarQ9BUT9
PhosPhoSitePlusQ9BUT9
Domains : Interpro (EBI)FAM195   
Domain families : Pfam (Sanger)FAM195 (PF14799)   
Domain families : Pfam (NCBI)pfam14799   
Conserved Domain (NCBI)FAM195A
DMDM Disease mutations84331
Blocks (Seattle)FAM195A
SuperfamilyQ9BUT9
Human Protein AtlasENSG00000172366
Peptide AtlasQ9BUT9
HPRD17503
IPIIPI00042604   IPI00056315   IPI00063942   
Protein Interaction databases
DIP (DOE-UCLA)Q9BUT9
IntAct (EBI)Q9BUT9
FunCoupENSG00000172366
BioGRIDFAM195A
STRING (EMBL)FAM195A
ZODIACFAM195A
Ontologies - Pathways
QuickGOQ9BUT9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM195A
Atlas of Cancer Signalling NetworkFAM195A
Wikipedia pathwaysFAM195A
Orthology - Evolution
OrthoDB84331
GeneTree (enSembl)ENSG00000172366
Phylogenetic Trees/Animal Genes : TreeFamFAM195A
HOVERGENQ9BUT9
HOGENOMQ9BUT9
Homologs : HomoloGeneFAM195A
Homology/Alignments : Family Browser (UCSC)FAM195A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM195A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM195A
dbVarFAM195A
ClinVarFAM195A
1000_GenomesFAM195A 
Exome Variant ServerFAM195A
ExAC (Exome Aggregation Consortium)FAM195A (select the gene name)
Genetic variants : HAPMAP84331
Genomic Variants (DGV)FAM195A [DGVbeta]
DECIPHER (Syndromes)16:691849-698474  ENSG00000172366
CONAN: Copy Number AnalysisFAM195A 
Mutations
ICGC Data PortalFAM195A 
TCGA Data PortalFAM195A 
Broad Tumor PortalFAM195A
OASIS PortalFAM195A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM195A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM195A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM195A
DgiDB (Drug Gene Interaction Database)FAM195A
DoCM (Curated mutations)FAM195A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM195A (select a term)
intoGenFAM195A
Cancer3DFAM195A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM195A
Genetic Testing Registry FAM195A
NextProtQ9BUT9 [Medical]
TSGene84331
GENETestsFAM195A
Huge Navigator FAM195A [HugePedia]
snp3D : Map Gene to Disease84331
BioCentury BCIQFAM195A
ClinGenFAM195A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84331
Chemical/Pharm GKB GenePA25527
Clinical trialFAM195A
Miscellaneous
canSAR (ICR)FAM195A (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM195A
EVEXFAM195A
GoPubMedFAM195A
iHOPFAM195A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:47 CET 2017

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