Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM195B (family with sequence similarity 195, member B)

Identity

Other alias-
HGNC (Hugo) FAM195B
LocusID (NCBI) 348262
Atlas_Id 63105
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 79780237 and ends at 79791170 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM195B   28007
Cards
Entrez_Gene (NCBI)FAM195B  348262  family with sequence similarity 195, member B
Aliases
GeneCards (Weizmann)FAM195B
Ensembl hg19 (Hinxton)ENSG00000225663 [Gene_View]  chr17:79780237-79791170 [Contig_View]  FAM195B [Vega]
Ensembl hg38 (Hinxton)ENSG00000225663 [Gene_View]  chr17:79780237-79791170 [Contig_View]  FAM195B [Vega]
ICGC DataPortalENSG00000225663
TCGA cBioPortalFAM195B
AceView (NCBI)FAM195B
Genatlas (Paris)FAM195B
WikiGenes348262
SOURCE (Princeton)FAM195B
Genetics Home Reference (NIH)FAM195B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM195B  -     chr17:79780237-79791170 -  17q25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM195B  -     17q25.3   [Description]    (hg38-Dec_2013)
EnsemblFAM195B - 17q25.3 [CytoView hg19]  FAM195B - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBIFAM195B [Mapview hg19]  FAM195B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000852 AK125584 BC017108 BC019318 BC041068
RefSeq transcript (Entrez)NM_001093767 NM_001288798 NM_001288799 NM_207368
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010663 NW_004929408
Consensus coding sequences : CCDS (NCBI)FAM195B
Cluster EST : UnigeneHs.514632 [ NCBI ]
CGAP (NCI)Hs.514632
Alternative Splicing GalleryENSG00000225663
Gene ExpressionFAM195B [ NCBI-GEO ]   FAM195B [ EBI - ARRAY_EXPRESS ]   FAM195B [ SEEK ]   FAM195B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM195B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)348262
GTEX Portal (Tissue expression)FAM195B
Protein : pattern, domain, 3D structure
UniProt/SwissProtC9JLW8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtC9JLW8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProC9JLW8
Splice isoforms : SwissVarC9JLW8
PhosPhoSitePlusC9JLW8
Domains : Interpro (EBI)FAM195   
Domain families : Pfam (Sanger)FAM195 (PF14799)   
Domain families : Pfam (NCBI)pfam14799   
Conserved Domain (NCBI)FAM195B
DMDM Disease mutations348262
Blocks (Seattle)FAM195B
SuperfamilyC9JLW8
Human Protein AtlasENSG00000225663
Peptide AtlasC9JLW8
HPRD14179
IPIIPI00746221   
Protein Interaction databases
DIP (DOE-UCLA)C9JLW8
IntAct (EBI)C9JLW8
FunCoupENSG00000225663
BioGRIDFAM195B
STRING (EMBL)FAM195B
ZODIACFAM195B
Ontologies - Pathways
QuickGOC9JLW8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM195B
Atlas of Cancer Signalling NetworkFAM195B
Wikipedia pathwaysFAM195B
Orthology - Evolution
OrthoDB348262
GeneTree (enSembl)ENSG00000225663
Phylogenetic Trees/Animal Genes : TreeFamFAM195B
HOVERGENC9JLW8
HOGENOMC9JLW8
Homologs : HomoloGeneFAM195B
Homology/Alignments : Family Browser (UCSC)FAM195B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM195B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM195B
dbVarFAM195B
ClinVarFAM195B
1000_GenomesFAM195B 
Exome Variant ServerFAM195B
ExAC (Exome Aggregation Consortium)FAM195B (select the gene name)
Genetic variants : HAPMAP348262
Genomic Variants (DGV)FAM195B [DGVbeta]
DECIPHER (Syndromes)17:79780237-79791170  ENSG00000225663
CONAN: Copy Number AnalysisFAM195B 
Mutations
ICGC Data PortalFAM195B 
TCGA Data PortalFAM195B 
Broad Tumor PortalFAM195B
OASIS PortalFAM195B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM195B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM195B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM195B
DgiDB (Drug Gene Interaction Database)FAM195B
DoCM (Curated mutations)FAM195B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM195B (select a term)
intoGenFAM195B
Cancer3DFAM195B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM195B
Genetic Testing Registry FAM195B
NextProtC9JLW8 [Medical]
TSGene348262
GENETestsFAM195B
Huge Navigator FAM195B [HugePedia]
snp3D : Map Gene to Disease348262
BioCentury BCIQFAM195B
ClinGenFAM195B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD348262
Chemical/Pharm GKB GenePA165431912
Clinical trialFAM195B
Miscellaneous
canSAR (ICR)FAM195B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM195B
EVEXFAM195B
GoPubMedFAM195B
iHOPFAM195B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:03:47 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.