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FAM19A2 (-)

Identity

Alias_namesfamily with sequence similarity 19 (chemokine (C-C motif)-like)
Alias_symbol (synonym)TAFA-2
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 338811
Atlas_Id 54306
Location -  [Link to chromosome band ]
Location_base_pair Starts at 61708248 and ends at 62192839 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CTDSP2 (12q14.1) / FAM19A2 (12q14.1)FAM19A2 (12q14.1) / KCNMB4 (12q15)PPM1H (12q14.1) / FAM19A2 (12q14.1)
RAB12 (18p11.22) / FAM19A2 (12q14.1)FAM19A2 12q14.1 / KCNMB4 12q15PPM1H 12q14.1 / FAM19A2 12q14.1
RAB12 18p11.22 / FAM19A2 12q14.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 4 ]

Solid Tumors TT_t1212q14q14ID101290 TT_t1212q14q14ID101297 TT_t1212q14q15ID101307 TT_t1218q14p11ID101531


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)FAM19A2  338811  -
Aliases
GeneCards (Weizmann)FAM19A2
Ensembl hg19 (Hinxton)ENSG00000198673 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198673 [Gene_View]  ENSG00000198673 [Sequence]  chr12:61708248-62192839 [Contig_View]  FAM19A2 [Vega]
ICGC DataPortalENSG00000198673
TCGA cBioPortalFAM19A2
AceView (NCBI)FAM19A2
Genatlas (Paris)FAM19A2
WikiGenes338811
SOURCE (Princeton)FAM19A2
Genetics Home Reference (NIH)FAM19A2
Genomic and cartography
GoldenPath hg38 (UCSC)FAM19A2  -     chr12:61708248-62192839 -  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM19A2  -     -   [Description]    (hg19-Feb_2009)
GoldenPathFAM19A2 - - [CytoView hg19]  FAM19A2 - - [CytoView hg38]
ImmunoBaseENSG00000198673
Mapping of homologs : NCBIFAM19A2 [Mapview hg19]  FAM19A2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM19A2
Alternative Splicing GalleryENSG00000198673
Gene ExpressionFAM19A2 [ NCBI-GEO ]   FAM19A2 [ EBI - ARRAY_EXPRESS ]   FAM19A2 [ SEEK ]   FAM19A2 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM19A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338811
GTEX Portal (Tissue expression)FAM19A2
Human Protein AtlasENSG00000198673-FAM19A2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM19A2
DMDM Disease mutations338811
Blocks (Seattle)FAM19A2
Human Protein Atlas [tissue]ENSG00000198673-FAM19A2 [tissue]
HPRD16876
IPIIPI00166553   IPI00654642   IPI01022217   IPI01021872   IPI01022949   IPI01021065   IPI01020896   
Protein Interaction databases
FunCoupENSG00000198673
BioGRIDFAM19A2
STRING (EMBL)FAM19A2
ZODIACFAM19A2
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease338811
BioCentury BCIQFAM19A2
ClinGenFAM19A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338811
Clinical trialFAM19A2
Miscellaneous
canSAR (ICR)FAM19A2 (select the gene name)
DataMed IndexFAM19A2
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM19A2
EVEXFAM19A2
GoPubMedFAM19A2
iHOPFAM19A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 12 15:33:38 CEST 2019

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