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FAM204A (family with sequence similarity 204, member A)

Identity

Alias_namesC10orf84
chromosome 10 open reading frame 84
family with sequence similarity 204, member A
Alias_symbol (synonym)FLJ13188
bA319I23.1
Other alias
HGNC (Hugo) FAM204A
LocusID (NCBI) 63877
Atlas_Id 63119
Location 10q26.11  [Link to chromosome band 10q26]
Location_base_pair Starts at 120068572 and ends at 120101839 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FAM204A (10q26.11) / AP1G2 (14q11.2)FAM204A (10q26.11) / SLC35B4 (7q33)PDGFRA (4q12) / FAM204A (10q26.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM204A   25794
Cards
Entrez_Gene (NCBI)FAM204A  63877  family with sequence similarity 204, member A
AliasesC10orf84; bA319I23.1
GeneCards (Weizmann)FAM204A
Ensembl hg19 (Hinxton) [Gene_View]  chr10:120068572-120101839 [Contig_View]  FAM204A [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:120068572-120101839 [Contig_View]  FAM204A [Vega]
TCGA cBioPortalFAM204A
AceView (NCBI)FAM204A
Genatlas (Paris)FAM204A
WikiGenes63877
SOURCE (Princeton)FAM204A
Genetics Home Reference (NIH)FAM204A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM204A  -     chr10:120068572-120101839 -  10q26.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM204A  -     10q26.11   [Description]    (hg38-Dec_2013)
EnsemblFAM204A - 10q26.11 [CytoView hg19]  FAM204A - 10q26.11 [CytoView hg38]
Mapping of homologs : NCBIFAM204A [Mapview hg19]  FAM204A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023250 AK026630 BC023577 BM837313 BX538256
RefSeq transcript (Entrez)NM_001134672 NM_022063
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)FAM204A
Cluster EST : UnigeneHs.372309 [ NCBI ]
CGAP (NCI)Hs.372309
Gene ExpressionFAM204A [ NCBI-GEO ]   FAM204A [ EBI - ARRAY_EXPRESS ]   FAM204A [ SEEK ]   FAM204A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM204A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63877
GTEX Portal (Tissue expression)FAM204A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8W3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8W3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8W3
Splice isoforms : SwissVarQ9H8W3
PhosPhoSitePlusQ9H8W3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM204A
DMDM Disease mutations63877
Blocks (Seattle)FAM204A
SuperfamilyQ9H8W3
Peptide AtlasQ9H8W3
HPRD12593
IPIIPI00004951   IPI01010577   IPI00647933   
Protein Interaction databases
DIP (DOE-UCLA)Q9H8W3
IntAct (EBI)Q9H8W3
BioGRIDFAM204A
STRING (EMBL)FAM204A
ZODIACFAM204A
Ontologies - Pathways
QuickGOQ9H8W3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM204A
Atlas of Cancer Signalling NetworkFAM204A
Wikipedia pathwaysFAM204A
Orthology - Evolution
OrthoDB63877
Phylogenetic Trees/Animal Genes : TreeFamFAM204A
HOVERGENQ9H8W3
HOGENOMQ9H8W3
Homologs : HomoloGeneFAM204A
Homology/Alignments : Family Browser (UCSC)FAM204A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM204A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM204A
dbVarFAM204A
ClinVarFAM204A
1000_GenomesFAM204A 
Exome Variant ServerFAM204A
ExAC (Exome Aggregation Consortium)FAM204A (select the gene name)
Genetic variants : HAPMAP63877
Genomic Variants (DGV)FAM204A [DGVbeta]
DECIPHER (Syndromes)10:120068572-120101839  
CONAN: Copy Number AnalysisFAM204A 
Mutations
ICGC Data PortalFAM204A 
TCGA Data PortalFAM204A 
Broad Tumor PortalFAM204A
OASIS PortalFAM204A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM204A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM204A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM204A
DgiDB (Drug Gene Interaction Database)FAM204A
DoCM (Curated mutations)FAM204A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM204A (select a term)
intoGenFAM204A
Cancer3DFAM204A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM204A
Genetic Testing Registry FAM204A
NextProtQ9H8W3 [Medical]
TSGene63877
GENETestsFAM204A
Huge Navigator FAM204A [HugePedia]
snp3D : Map Gene to Disease63877
BioCentury BCIQFAM204A
ClinGenFAM204A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD63877
Chemical/Pharm GKB GenePA134910767
Clinical trialFAM204A
Miscellaneous
canSAR (ICR)FAM204A (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM204A
EVEXFAM204A
GoPubMedFAM204A
iHOPFAM204A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:50 CET 2017

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