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FAM205A (family with sequence similarity 205 member A)

Identity

Alias_namesfamily with sequence similarity 205, member A
Alias_symbol (synonym)C9orf144B
Other alias
HGNC (Hugo) FAM205A
LocusID (NCBI) 259308
Atlas_Id 63120
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 34723053 and ends at 34729538 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM205A   41911
Cards
Entrez_Gene (NCBI)FAM205A  259308  family with sequence similarity 205 member A
AliasesC9orf144B
GeneCards (Weizmann)FAM205A
Ensembl hg19 (Hinxton)ENSG00000205108 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205108 [Gene_View]  chr9:34723053-34729538 [Contig_View]  FAM205A [Vega]
ICGC DataPortalENSG00000205108
TCGA cBioPortalFAM205A
AceView (NCBI)FAM205A
Genatlas (Paris)FAM205A
WikiGenes259308
SOURCE (Princeton)FAM205A
Genetics Home Reference (NIH)FAM205A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM205A  -     chr9:34723053-34729538 -  9p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM205A  -     9p13.3   [Description]    (hg19-Feb_2009)
EnsemblFAM205A - 9p13.3 [CytoView hg19]  FAM205A - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIFAM205A [Mapview hg19]  FAM205A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125949 AK302320 BX104598 DC402407 DC403775
RefSeq transcript (Entrez)NM_001141917
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM205A
Cluster EST : UnigeneHs.522093 [ NCBI ]
CGAP (NCI)Hs.522093
Alternative Splicing GalleryENSG00000205108
Gene ExpressionFAM205A [ NCBI-GEO ]   FAM205A [ EBI - ARRAY_EXPRESS ]   FAM205A [ SEEK ]   FAM205A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM205A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259308
GTEX Portal (Tissue expression)FAM205A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZU69   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZU69  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZU69
Splice isoforms : SwissVarQ6ZU69
PhosPhoSitePlusQ6ZU69
Domains : Interpro (EBI)DUF4599   
Domain families : Pfam (Sanger)DUF4599 (PF15371)   
Domain families : Pfam (NCBI)pfam15371   
Conserved Domain (NCBI)FAM205A
DMDM Disease mutations259308
Blocks (Seattle)FAM205A
SuperfamilyQ6ZU69
Human Protein AtlasENSG00000205108
Peptide AtlasQ6ZU69
IPIIPI00445371   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZU69
IntAct (EBI)Q6ZU69
FunCoupENSG00000205108
BioGRIDFAM205A
STRING (EMBL)FAM205A
ZODIACFAM205A
Ontologies - Pathways
QuickGOQ6ZU69
Ontology : AmiGOnucleus  integral component of membrane  
Ontology : EGO-EBInucleus  integral component of membrane  
NDEx NetworkFAM205A
Atlas of Cancer Signalling NetworkFAM205A
Wikipedia pathwaysFAM205A
Orthology - Evolution
OrthoDB259308
GeneTree (enSembl)ENSG00000205108
Phylogenetic Trees/Animal Genes : TreeFamFAM205A
HOVERGENQ6ZU69
HOGENOMQ6ZU69
Homologs : HomoloGeneFAM205A
Homology/Alignments : Family Browser (UCSC)FAM205A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM205A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM205A
dbVarFAM205A
ClinVarFAM205A
1000_GenomesFAM205A 
Exome Variant ServerFAM205A
ExAC (Exome Aggregation Consortium)FAM205A (select the gene name)
Genetic variants : HAPMAP259308
Genomic Variants (DGV)FAM205A [DGVbeta]
DECIPHERFAM205A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM205A 
Mutations
ICGC Data PortalFAM205A 
TCGA Data PortalFAM205A 
Broad Tumor PortalFAM205A
OASIS PortalFAM205A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM205A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM205A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM205A
DgiDB (Drug Gene Interaction Database)FAM205A
DoCM (Curated mutations)FAM205A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM205A (select a term)
intoGenFAM205A
Cancer3DFAM205A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM205A
Genetic Testing Registry FAM205A
NextProtQ6ZU69 [Medical]
TSGene259308
GENETestsFAM205A
Target ValidationFAM205A
Huge Navigator FAM205A [HugePedia]
snp3D : Map Gene to Disease259308
BioCentury BCIQFAM205A
ClinGenFAM205A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD259308
Chemical/Pharm GKB GenePA166049077
Clinical trialFAM205A
Miscellaneous
canSAR (ICR)FAM205A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM205A
EVEXFAM205A
GoPubMedFAM205A
iHOPFAM205A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:50 CEST 2017

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