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FAM205C (family with sequence similarity 205 member C)

Identity

Alias_namesFAM205CP
family with sequence similarity 205, member C, pseudogene
family with sequence similarity 205, member C
Other alias
HGNC (Hugo) FAM205C
LocusID (NCBI) 100129969
Atlas_Id 77797
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 34889064 and ends at 34895778 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM205C   42673
Cards
Entrez_Gene (NCBI)FAM205C  100129969  family with sequence similarity 205 member C
AliasesFAM205CP
GeneCards (Weizmann)FAM205C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:34889064-34895778 [Contig_View]  FAM205C [Vega]
TCGA cBioPortalFAM205C
AceView (NCBI)FAM205C
Genatlas (Paris)FAM205C
WikiGenes100129969
SOURCE (Princeton)FAM205C
Genetics Home Reference (NIH)FAM205C
Genomic and cartography
GoldenPath hg38 (UCSC)FAM205C  -     chr9:34889064-34895778 -  9p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM205C  -     9p13.3   [Description]    (hg19-Feb_2009)
EnsemblFAM205C - 9p13.3 [CytoView hg19]  FAM205C - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIFAM205C [Mapview hg19]  FAM205C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI125404 AI208217 DB042441 DB454411
RefSeq transcript (Entrez)NM_001309426 NM_001309427
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM205C
Cluster EST : UnigeneHs.571602 [ NCBI ]
CGAP (NCI)Hs.571602
Gene ExpressionFAM205C [ NCBI-GEO ]   FAM205C [ EBI - ARRAY_EXPRESS ]   FAM205C [ SEEK ]   FAM205C [ MEM ]
Gene Expression Viewer (FireBrowse)FAM205C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129969
GTEX Portal (Tissue expression)FAM205C
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NFA0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NFA0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NFA0
Splice isoforms : SwissVarA6NFA0
PhosPhoSitePlusA6NFA0
Domains : Interpro (EBI)DUF4599   
Domain families : Pfam (Sanger)DUF4599 (PF15371)   
Domain families : Pfam (NCBI)pfam15371   
Conserved Domain (NCBI)FAM205C
DMDM Disease mutations100129969
Blocks (Seattle)FAM205C
SuperfamilyA6NFA0
Peptide AtlasA6NFA0
IPIIPI00829857   IPI00973194   
Protein Interaction databases
DIP (DOE-UCLA)A6NFA0
IntAct (EBI)A6NFA0
BioGRIDFAM205C
STRING (EMBL)FAM205C
ZODIACFAM205C
Ontologies - Pathways
QuickGOA6NFA0
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkFAM205C
Atlas of Cancer Signalling NetworkFAM205C
Wikipedia pathwaysFAM205C
Orthology - Evolution
OrthoDB100129969
Phylogenetic Trees/Animal Genes : TreeFamFAM205C
HOVERGENA6NFA0
HOGENOMA6NFA0
Homologs : HomoloGeneFAM205C
Homology/Alignments : Family Browser (UCSC)FAM205C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM205C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM205C
dbVarFAM205C
ClinVarFAM205C
1000_GenomesFAM205C 
Exome Variant ServerFAM205C
ExAC (Exome Aggregation Consortium)FAM205C (select the gene name)
Genetic variants : HAPMAP100129969
Genomic Variants (DGV)FAM205C [DGVbeta]
DECIPHERFAM205C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM205C 
Mutations
ICGC Data PortalFAM205C 
TCGA Data PortalFAM205C 
Broad Tumor PortalFAM205C
OASIS PortalFAM205C [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM205C
BioMutasearch FAM205C
DgiDB (Drug Gene Interaction Database)FAM205C
DoCM (Curated mutations)FAM205C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM205C (select a term)
intoGenFAM205C
Cancer3DFAM205C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM205C
Genetic Testing Registry FAM205C
NextProtA6NFA0 [Medical]
TSGene100129969
GENETestsFAM205C
Target ValidationFAM205C
Huge Navigator FAM205C [HugePedia]
snp3D : Map Gene to Disease100129969
BioCentury BCIQFAM205C
ClinGenFAM205C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129969
Clinical trialFAM205C
Miscellaneous
canSAR (ICR)FAM205C (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM205C
EVEXFAM205C
GoPubMedFAM205C
iHOPFAM205C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:48:11 CEST 2017

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