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FAM206A (family with sequence similarity 206, member A)

Identity

Alias_namesC9orf6
chromosome 9 open reading frame 6
family with sequence similarity 206, member A
Alias_symbol (synonym)CG-8
FLJ20457
Simiate
Other alias
HGNC (Hugo) FAM206A
LocusID (NCBI) 54942
Atlas_Id 63122
Location 9q31.3  [Link to chromosome band 9q31]
Location_base_pair Starts at 111696673 and ends at 111703237 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM206A   1364
Cards
Entrez_Gene (NCBI)FAM206A  54942  family with sequence similarity 206, member A
AliasesC9orf6; CG-8; Simiate
GeneCards (Weizmann)FAM206A
Ensembl hg19 (Hinxton)ENSG00000119328 [Gene_View]  chr9:111696673-111703237 [Contig_View]  FAM206A [Vega]
Ensembl hg38 (Hinxton)ENSG00000119328 [Gene_View]  chr9:111696673-111703237 [Contig_View]  FAM206A [Vega]
ICGC DataPortalENSG00000119328
TCGA cBioPortalFAM206A
AceView (NCBI)FAM206A
Genatlas (Paris)FAM206A
WikiGenes54942
SOURCE (Princeton)FAM206A
Genetics Home Reference (NIH)FAM206A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM206A  -     chr9:111696673-111703237 +  9q31.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM206A  -     9q31.3   [Description]    (hg38-Dec_2013)
EnsemblFAM206A - 9q31.3 [CytoView hg19]  FAM206A - 9q31.3 [CytoView hg38]
Mapping of homologs : NCBIFAM206A [Mapview hg19]  FAM206A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF153417 AK000464 AK310297 BC015795 BC051827
RefSeq transcript (Entrez)NM_017832
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)FAM206A
Cluster EST : UnigeneHs.29276 [ NCBI ]
CGAP (NCI)Hs.29276
Alternative Splicing GalleryENSG00000119328
Gene ExpressionFAM206A [ NCBI-GEO ]   FAM206A [ EBI - ARRAY_EXPRESS ]   FAM206A [ SEEK ]   FAM206A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM206A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54942
GTEX Portal (Tissue expression)FAM206A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NX38   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NX38  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NX38
Splice isoforms : SwissVarQ9NX38
PhosPhoSitePlusQ9NX38
Domains : Interpro (EBI)GCV_H    Single_hybrid_motif   
Domain families : Pfam (Sanger)GCV_H (PF01597)   
Domain families : Pfam (NCBI)pfam01597   
Conserved Domain (NCBI)FAM206A
DMDM Disease mutations54942
Blocks (Seattle)FAM206A
SuperfamilyQ9NX38
Human Protein AtlasENSG00000119328
Peptide AtlasQ9NX38
HPRD07911
IPIIPI00016408   IPI00552285   IPI00552472   
Protein Interaction databases
DIP (DOE-UCLA)Q9NX38
IntAct (EBI)Q9NX38
FunCoupENSG00000119328
BioGRIDFAM206A
STRING (EMBL)FAM206A
ZODIACFAM206A
Ontologies - Pathways
QuickGOQ9NX38
Ontology : AmiGOprotein binding  nuclear speck  
Ontology : EGO-EBIprotein binding  nuclear speck  
NDEx NetworkFAM206A
Atlas of Cancer Signalling NetworkFAM206A
Wikipedia pathwaysFAM206A
Orthology - Evolution
OrthoDB54942
GeneTree (enSembl)ENSG00000119328
Phylogenetic Trees/Animal Genes : TreeFamFAM206A
HOVERGENQ9NX38
HOGENOMQ9NX38
Homologs : HomoloGeneFAM206A
Homology/Alignments : Family Browser (UCSC)FAM206A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM206A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM206A
dbVarFAM206A
ClinVarFAM206A
1000_GenomesFAM206A 
Exome Variant ServerFAM206A
ExAC (Exome Aggregation Consortium)FAM206A (select the gene name)
Genetic variants : HAPMAP54942
Genomic Variants (DGV)FAM206A [DGVbeta]
DECIPHER (Syndromes)9:111696673-111703237  ENSG00000119328
CONAN: Copy Number AnalysisFAM206A 
Mutations
ICGC Data PortalFAM206A 
TCGA Data PortalFAM206A 
Broad Tumor PortalFAM206A
OASIS PortalFAM206A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM206A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM206A
DgiDB (Drug Gene Interaction Database)FAM206A
DoCM (Curated mutations)FAM206A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM206A (select a term)
intoGenFAM206A
Cancer3DFAM206A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM206A
Genetic Testing Registry FAM206A
NextProtQ9NX38 [Medical]
TSGene54942
GENETestsFAM206A
Huge Navigator FAM206A [HugePedia]
snp3D : Map Gene to Disease54942
BioCentury BCIQFAM206A
ClinGenFAM206A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54942
Chemical/Pharm GKB GenePA25981
Clinical trialFAM206A
Miscellaneous
canSAR (ICR)FAM206A (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM206A
EVEXFAM206A
GoPubMedFAM206A
iHOPFAM206A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:51 CET 2017

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