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FAM207A (family with sequence similarity 207 member A)

Identity

Alias_namesC21orf70
chromosome 21 open reading frame 70
family with sequence similarity 207, member A
Alias_symbol (synonym)PRED56
Other alias
HGNC (Hugo) FAM207A
LocusID (NCBI) 85395
Atlas_Id 63123
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44939997 and ends at 44976989 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM207A   15811
Cards
Entrez_Gene (NCBI)FAM207A  85395  family with sequence similarity 207 member A
AliasesC21orf70; PRED56
GeneCards (Weizmann)FAM207A
Ensembl hg19 (Hinxton)ENSG00000160256 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160256 [Gene_View]  chr21:44939997-44976989 [Contig_View]  FAM207A [Vega]
ICGC DataPortalENSG00000160256
TCGA cBioPortalFAM207A
AceView (NCBI)FAM207A
Genatlas (Paris)FAM207A
WikiGenes85395
SOURCE (Princeton)FAM207A
Genetics Home Reference (NIH)FAM207A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM207A  -     chr21:44939997-44976989 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM207A  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblFAM207A - 21q22.3 [CytoView hg19]  FAM207A - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIFAM207A [Mapview hg19]  FAM207A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA037661 AF391113 AF391114 BC009341 BG479572
RefSeq transcript (Entrez)NM_001316983 NM_001316984 NM_001316985 NM_001316986 NM_001316987 NM_001316988 NM_058190
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM207A
Cluster EST : UnigeneHs.410830 [ NCBI ]
CGAP (NCI)Hs.410830
Alternative Splicing GalleryENSG00000160256
Gene ExpressionFAM207A [ NCBI-GEO ]   FAM207A [ EBI - ARRAY_EXPRESS ]   FAM207A [ SEEK ]   FAM207A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM207A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85395
GTEX Portal (Tissue expression)FAM207A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NSI2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NSI2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NSI2
Splice isoforms : SwissVarQ9NSI2
PhosPhoSitePlusQ9NSI2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM207A
DMDM Disease mutations85395
Blocks (Seattle)FAM207A
SuperfamilyQ9NSI2
Human Protein AtlasENSG00000160256
Peptide AtlasQ9NSI2
HPRD10765
IPIIPI00027898   IPI00217294   IPI00789749   
Protein Interaction databases
DIP (DOE-UCLA)Q9NSI2
IntAct (EBI)Q9NSI2
FunCoupENSG00000160256
BioGRIDFAM207A
STRING (EMBL)FAM207A
ZODIACFAM207A
Ontologies - Pathways
QuickGOQ9NSI2
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkFAM207A
Atlas of Cancer Signalling NetworkFAM207A
Wikipedia pathwaysFAM207A
Orthology - Evolution
OrthoDB85395
GeneTree (enSembl)ENSG00000160256
Phylogenetic Trees/Animal Genes : TreeFamFAM207A
HOVERGENQ9NSI2
HOGENOMQ9NSI2
Homologs : HomoloGeneFAM207A
Homology/Alignments : Family Browser (UCSC)FAM207A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM207A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM207A
dbVarFAM207A
ClinVarFAM207A
1000_GenomesFAM207A 
Exome Variant ServerFAM207A
ExAC (Exome Aggregation Consortium)FAM207A (select the gene name)
Genetic variants : HAPMAP85395
Genomic Variants (DGV)FAM207A [DGVbeta]
DECIPHERFAM207A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM207A 
Mutations
ICGC Data PortalFAM207A 
TCGA Data PortalFAM207A 
Broad Tumor PortalFAM207A
OASIS PortalFAM207A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM207A
BioMutasearch FAM207A
DgiDB (Drug Gene Interaction Database)FAM207A
DoCM (Curated mutations)FAM207A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM207A (select a term)
intoGenFAM207A
Cancer3DFAM207A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM207A
Genetic Testing Registry FAM207A
NextProtQ9NSI2 [Medical]
TSGene85395
GENETestsFAM207A
Target ValidationFAM207A
Huge Navigator FAM207A [HugePedia]
snp3D : Map Gene to Disease85395
BioCentury BCIQFAM207A
ClinGenFAM207A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85395
Chemical/Pharm GKB GenePA25865
Clinical trialFAM207A
Miscellaneous
canSAR (ICR)FAM207A (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM207A
EVEXFAM207A
GoPubMedFAM207A
iHOPFAM207A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:51 CEST 2017

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