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FAM210A (family with sequence similarity 210 member A)

Identity

Alias_namesC18orf19
chromosome 18 open reading frame 19
family with sequence similarity 210, member A
Alias_symbol (synonym)MGC24180
HsT2329
Other alias
HGNC (Hugo) FAM210A
LocusID (NCBI) 125228
Atlas_Id 63131
Location 18p11.21  [Link to chromosome band 18p11]
Location_base_pair Starts at 13663347 and ends at 13726592 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ESCO1 (18q11.2) / FAM210A (18p11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM210A   28346
Cards
Entrez_Gene (NCBI)FAM210A  125228  family with sequence similarity 210 member A
AliasesC18orf19; HsT2329
GeneCards (Weizmann)FAM210A
Ensembl hg19 (Hinxton)ENSG00000177150 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177150 [Gene_View]  chr18:13663347-13726592 [Contig_View]  FAM210A [Vega]
ICGC DataPortalENSG00000177150
TCGA cBioPortalFAM210A
AceView (NCBI)FAM210A
Genatlas (Paris)FAM210A
WikiGenes125228
SOURCE (Princeton)FAM210A
Genetics Home Reference (NIH)FAM210A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM210A  -     chr18:13663347-13726592 -  18p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM210A  -     18p11.21   [Description]    (hg19-Feb_2009)
EnsemblFAM210A - 18p11.21 [CytoView hg19]  FAM210A - 18p11.21 [CytoView hg38]
Mapping of homologs : NCBIFAM210A [Mapview hg19]  FAM210A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA602175 AK055618 AK309506 AK309819 BU189118
RefSeq transcript (Entrez)NM_001098801 NM_152352
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM210A
Cluster EST : UnigeneHs.13034 [ NCBI ]
CGAP (NCI)Hs.13034
Alternative Splicing GalleryENSG00000177150
Gene ExpressionFAM210A [ NCBI-GEO ]   FAM210A [ EBI - ARRAY_EXPRESS ]   FAM210A [ SEEK ]   FAM210A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM210A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)125228
GTEX Portal (Tissue expression)FAM210A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96ND0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96ND0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96ND0
Splice isoforms : SwissVarQ96ND0
PhosPhoSitePlusQ96ND0
Domains : Interpro (EBI)DUF1279   
Domain families : Pfam (Sanger)DUF1279 (PF06916)   
Domain families : Pfam (NCBI)pfam06916   
Conserved Domain (NCBI)FAM210A
DMDM Disease mutations125228
Blocks (Seattle)FAM210A
SuperfamilyQ96ND0
Human Protein AtlasENSG00000177150
Peptide AtlasQ96ND0
HPRD10717
IPIIPI00290799   
Protein Interaction databases
DIP (DOE-UCLA)Q96ND0
IntAct (EBI)Q96ND0
FunCoupENSG00000177150
BioGRIDFAM210A
STRING (EMBL)FAM210A
ZODIACFAM210A
Ontologies - Pathways
QuickGOQ96ND0
Ontology : AmiGOmitochondrion  integral component of membrane  
Ontology : EGO-EBImitochondrion  integral component of membrane  
NDEx NetworkFAM210A
Atlas of Cancer Signalling NetworkFAM210A
Wikipedia pathwaysFAM210A
Orthology - Evolution
OrthoDB125228
GeneTree (enSembl)ENSG00000177150
Phylogenetic Trees/Animal Genes : TreeFamFAM210A
HOVERGENQ96ND0
HOGENOMQ96ND0
Homologs : HomoloGeneFAM210A
Homology/Alignments : Family Browser (UCSC)FAM210A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM210A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM210A
dbVarFAM210A
ClinVarFAM210A
1000_GenomesFAM210A 
Exome Variant ServerFAM210A
ExAC (Exome Aggregation Consortium)FAM210A (select the gene name)
Genetic variants : HAPMAP125228
Genomic Variants (DGV)FAM210A [DGVbeta]
DECIPHERFAM210A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM210A 
Mutations
ICGC Data PortalFAM210A 
TCGA Data PortalFAM210A 
Broad Tumor PortalFAM210A
OASIS PortalFAM210A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM210A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM210A
DgiDB (Drug Gene Interaction Database)FAM210A
DoCM (Curated mutations)FAM210A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM210A (select a term)
intoGenFAM210A
Cancer3DFAM210A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM210A
Genetic Testing Registry FAM210A
NextProtQ96ND0 [Medical]
TSGene125228
GENETestsFAM210A
Target ValidationFAM210A
Huge Navigator FAM210A [HugePedia]
snp3D : Map Gene to Disease125228
BioCentury BCIQFAM210A
ClinGenFAM210A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD125228
Chemical/Pharm GKB GenePA134993051
Clinical trialFAM210A
Miscellaneous
canSAR (ICR)FAM210A (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM210A
EVEXFAM210A
GoPubMedFAM210A
iHOPFAM210A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:48:13 CEST 2017

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