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FAM210B (family with sequence similarity 210 member B)

Identity

Other alias5A3
C20orf108
dJ1167H4.1
HGNC (Hugo) FAM210B
LocusID (NCBI) 116151
Atlas_Id 57569
Location 3p14.1  [Link to chromosome band 3p14]
Location_base_pair Starts at 56358927 and ends at 56368662 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAM210B (20q13.2) / FAM210B (20q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM210B   16102
Cards
Entrez_Gene (NCBI)FAM210B  116151  family with sequence similarity 210 member B
Aliases5A3; C20orf108; dJ1167H4.1
GeneCards (Weizmann)FAM210B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr20:56358927-56368662 [Contig_View]  FAM210B [Vega]
TCGA cBioPortalFAM210B
AceView (NCBI)FAM210B
Genatlas (Paris)FAM210B
WikiGenes116151
SOURCE (Princeton)FAM210B
Genetics Home Reference (NIH)FAM210B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM210B  -     chr20:56358927-56368662 +  3p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM210B  -     3p14.1   [Description]    (hg19-Feb_2009)
EnsemblFAM210B - 3p14.1 [CytoView hg19]  FAM210B - 3p14.1 [CytoView hg38]
Mapping of homologs : NCBIFAM210B [Mapview hg19]  FAM210B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ311123 AK075565 AK314768 AL133555 BC017725
RefSeq transcript (Entrez)NM_080821
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM210B
Cluster EST : UnigeneHs.143736 [ NCBI ]
CGAP (NCI)Hs.143736
Gene ExpressionFAM210B [ NCBI-GEO ]   FAM210B [ EBI - ARRAY_EXPRESS ]   FAM210B [ SEEK ]   FAM210B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM210B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116151
GTEX Portal (Tissue expression)FAM210B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96KR6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96KR6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96KR6
Splice isoforms : SwissVarQ96KR6
PhosPhoSitePlusQ96KR6
Domains : Interpro (EBI)DUF1279   
Domain families : Pfam (Sanger)DUF1279 (PF06916)   
Domain families : Pfam (NCBI)pfam06916   
Conserved Domain (NCBI)FAM210B
DMDM Disease mutations116151
Blocks (Seattle)FAM210B
SuperfamilyQ96KR6
Peptide AtlasQ96KR6
IPIIPI00096986   IPI00375439   
Protein Interaction databases
DIP (DOE-UCLA)Q96KR6
IntAct (EBI)Q96KR6
BioGRIDFAM210B
STRING (EMBL)FAM210B
ZODIACFAM210B
Ontologies - Pathways
QuickGOQ96KR6
Ontology : AmiGOmitochondrial outer membrane  integral component of membrane  intrinsic component of membrane  erythrocyte maturation  positive regulation of erythrocyte differentiation  cellular response to estradiol stimulus  
Ontology : EGO-EBImitochondrial outer membrane  integral component of membrane  intrinsic component of membrane  erythrocyte maturation  positive regulation of erythrocyte differentiation  cellular response to estradiol stimulus  
NDEx NetworkFAM210B
Atlas of Cancer Signalling NetworkFAM210B
Wikipedia pathwaysFAM210B
Orthology - Evolution
OrthoDB116151
Phylogenetic Trees/Animal Genes : TreeFamFAM210B
HOVERGENQ96KR6
HOGENOMQ96KR6
Homologs : HomoloGeneFAM210B
Homology/Alignments : Family Browser (UCSC)FAM210B
Gene fusions - Rearrangements
Fusion : QuiverFAM210B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM210B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM210B
dbVarFAM210B
ClinVarFAM210B
1000_GenomesFAM210B 
Exome Variant ServerFAM210B
Varsome BrowserFAM210B
Genetic variants : HAPMAP116151
Genomic Variants (DGV)FAM210B [DGVbeta]
DECIPHERFAM210B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM210B 
Mutations
ICGC Data PortalFAM210B 
TCGA Data PortalFAM210B 
Broad Tumor PortalFAM210B
OASIS PortalFAM210B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM210B
BioMutasearch FAM210B
DgiDB (Drug Gene Interaction Database)FAM210B
DoCM (Curated mutations)FAM210B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM210B (select a term)
intoGenFAM210B
Cancer3DFAM210B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM210B
MedgenFAM210B
Genetic Testing Registry FAM210B
NextProtQ96KR6 [Medical]
TSGene116151
GENETestsFAM210B
Target ValidationFAM210B
Huge Navigator FAM210B [HugePedia]
snp3D : Map Gene to Disease116151
BioCentury BCIQFAM210B
ClinGenFAM210B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD116151
Chemical/Pharm GKB GenePA25647
Clinical trialFAM210B
Miscellaneous
canSAR (ICR)FAM210B (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM210B
EVEXFAM210B
GoPubMedFAM210B
iHOPFAM210B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:52:48 CEST 2018

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