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FAM212B (family with sequence similarity 212, member B)

Identity

Alias_namesC1orf183
chromosome 1 open reading frame 183
family with sequence similarity 212, member B
Alias_symbol (synonym)FLJ31105
Other alias
HGNC (Hugo) FAM212B
LocusID (NCBI) 55924
Atlas_Id 63134
Location 1p13.2  [Link to chromosome band 1p13]
Location_base_pair Starts at 112264686 and ends at 112282046 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM212B   28045
Cards
Entrez_Gene (NCBI)FAM212B  55924  family with sequence similarity 212, member B
AliasesC1orf183
GeneCards (Weizmann)FAM212B
Ensembl hg19 (Hinxton)ENSG00000197852 [Gene_View]  chr1:112264686-112282046 [Contig_View]  FAM212B [Vega]
Ensembl hg38 (Hinxton)ENSG00000197852 [Gene_View]  chr1:112264686-112282046 [Contig_View]  FAM212B [Vega]
ICGC DataPortalENSG00000197852
TCGA cBioPortalFAM212B
AceView (NCBI)FAM212B
Genatlas (Paris)FAM212B
WikiGenes55924
SOURCE (Princeton)FAM212B
Genetics Home Reference (NIH)FAM212B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM212B  -     chr1:112264686-112282046 -  1p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM212B  -     1p13.2   [Description]    (hg38-Dec_2013)
EnsemblFAM212B - 1p13.2 [CytoView hg19]  FAM212B - 1p13.2 [CytoView hg38]
Mapping of homologs : NCBIFAM212B [Mapview hg19]  FAM212B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055667 AK092074 AK094997 AK293989 AK295012
RefSeq transcript (Entrez)NM_019099 NM_198926
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)FAM212B
Cluster EST : UnigeneHs.193406 [ NCBI ]
CGAP (NCI)Hs.193406
Alternative Splicing GalleryENSG00000197852
Gene ExpressionFAM212B [ NCBI-GEO ]   FAM212B [ EBI - ARRAY_EXPRESS ]   FAM212B [ SEEK ]   FAM212B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM212B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55924
GTEX Portal (Tissue expression)FAM212B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NTI7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NTI7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NTI7
Splice isoforms : SwissVarQ9NTI7
PhosPhoSitePlusQ9NTI7
Domains : Interpro (EBI)FAM212   
Domain families : Pfam (Sanger)FAM212 (PF15342)   
Domain families : Pfam (NCBI)pfam15342   
Conserved Domain (NCBI)FAM212B
DMDM Disease mutations55924
Blocks (Seattle)FAM212B
SuperfamilyQ9NTI7
Human Protein AtlasENSG00000197852
Peptide AtlasQ9NTI7
HPRD14246
IPIIPI00005176   IPI00396182   IPI00981024   IPI00909526   IPI00983457   
Protein Interaction databases
DIP (DOE-UCLA)Q9NTI7
IntAct (EBI)Q9NTI7
FunCoupENSG00000197852
BioGRIDFAM212B
STRING (EMBL)FAM212B
ZODIACFAM212B
Ontologies - Pathways
QuickGOQ9NTI7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM212B
Atlas of Cancer Signalling NetworkFAM212B
Wikipedia pathwaysFAM212B
Orthology - Evolution
OrthoDB55924
GeneTree (enSembl)ENSG00000197852
Phylogenetic Trees/Animal Genes : TreeFamFAM212B
HOVERGENQ9NTI7
HOGENOMQ9NTI7
Homologs : HomoloGeneFAM212B
Homology/Alignments : Family Browser (UCSC)FAM212B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM212B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM212B
dbVarFAM212B
ClinVarFAM212B
1000_GenomesFAM212B 
Exome Variant ServerFAM212B
ExAC (Exome Aggregation Consortium)FAM212B (select the gene name)
Genetic variants : HAPMAP55924
Genomic Variants (DGV)FAM212B [DGVbeta]
DECIPHER (Syndromes)1:112264686-112282046  ENSG00000197852
CONAN: Copy Number AnalysisFAM212B 
Mutations
ICGC Data PortalFAM212B 
TCGA Data PortalFAM212B 
Broad Tumor PortalFAM212B
OASIS PortalFAM212B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM212B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM212B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM212B
DgiDB (Drug Gene Interaction Database)FAM212B
DoCM (Curated mutations)FAM212B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM212B (select a term)
intoGenFAM212B
Cancer3DFAM212B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM212B
Genetic Testing Registry FAM212B
NextProtQ9NTI7 [Medical]
TSGene55924
GENETestsFAM212B
Huge Navigator FAM212B [HugePedia]
snp3D : Map Gene to Disease55924
BioCentury BCIQFAM212B
ClinGenFAM212B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55924
Chemical/Pharm GKB GenePA142672431
Clinical trialFAM212B
Miscellaneous
canSAR (ICR)FAM212B (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM212B
EVEXFAM212B
GoPubMedFAM212B
iHOPFAM212B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:54 CET 2017

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