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FAM214A (family with sequence similarity 214, member A)

Identity

Alias_namesKIAA1370
KIAA1370
family with sequence similarity 214, member A
Alias_symbol (synonym)FLJ10980
Other alias
HGNC (Hugo) FAM214A
LocusID (NCBI) 56204
Atlas_Id 63138
Location 15q21.2  [Link to chromosome band 15q21]
Location_base_pair Starts at 52873518 and ends at 52944247 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FAM214A (15q21.2) / CCNDBP1 (15q15.2)FAM214A (15q21.2) / FAM169B (15q26.3)FAM214A (15q21.2) / FAM214A (15q21.2)
GALK2 (15q21.1) / FAM214A (15q21.2)MYO5C (15q21.2) / FAM214A (15q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM214A   25609
Cards
Entrez_Gene (NCBI)FAM214A  56204  family with sequence similarity 214, member A
AliasesKIAA1370
GeneCards (Weizmann)FAM214A
Ensembl hg19 (Hinxton)ENSG00000047346 [Gene_View]  chr15:52873518-52944247 [Contig_View]  FAM214A [Vega]
Ensembl hg38 (Hinxton)ENSG00000047346 [Gene_View]  chr15:52873518-52944247 [Contig_View]  FAM214A [Vega]
ICGC DataPortalENSG00000047346
TCGA cBioPortalFAM214A
AceView (NCBI)FAM214A
Genatlas (Paris)FAM214A
WikiGenes56204
SOURCE (Princeton)FAM214A
Genetics Home Reference (NIH)FAM214A
Genomic and cartography
GoldenPath hg19 (UCSC)FAM214A  -     chr15:52873518-52944247 -  15q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM214A  -     15q21.2   [Description]    (hg38-Dec_2013)
EnsemblFAM214A - 15q21.2 [CytoView hg19]  FAM214A - 15q21.2 [CytoView hg38]
Mapping of homologs : NCBIFAM214A [Mapview hg19]  FAM214A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB037791 AK001842 AK292917 AK293730 AK293920
RefSeq transcript (Entrez)NM_001286495 NM_019600
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)FAM214A
Cluster EST : UnigeneHs.152385 [ NCBI ]
CGAP (NCI)Hs.152385
Alternative Splicing GalleryENSG00000047346
Gene ExpressionFAM214A [ NCBI-GEO ]   FAM214A [ EBI - ARRAY_EXPRESS ]   FAM214A [ SEEK ]   FAM214A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM214A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56204
GTEX Portal (Tissue expression)FAM214A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ32MH5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ32MH5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ32MH5
Splice isoforms : SwissVarQ32MH5
PhosPhoSitePlusQ32MH5
Domains : Interpro (EBI)DUF4210   
Domain families : Pfam (Sanger)DUF4210 (PF13915)   
Domain families : Pfam (NCBI)pfam13915   
Conserved Domain (NCBI)FAM214A
DMDM Disease mutations56204
Blocks (Seattle)FAM214A
SuperfamilyQ32MH5
Human Protein AtlasENSG00000047346
Peptide AtlasQ32MH5
HPRD10965
IPIIPI01010382   IPI00797998   IPI00001192   IPI01011757   
Protein Interaction databases
DIP (DOE-UCLA)Q32MH5
IntAct (EBI)Q32MH5
FunCoupENSG00000047346
BioGRIDFAM214A
STRING (EMBL)FAM214A
ZODIACFAM214A
Ontologies - Pathways
QuickGOQ32MH5
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkFAM214A
Atlas of Cancer Signalling NetworkFAM214A
Wikipedia pathwaysFAM214A
Orthology - Evolution
OrthoDB56204
GeneTree (enSembl)ENSG00000047346
Phylogenetic Trees/Animal Genes : TreeFamFAM214A
HOVERGENQ32MH5
HOGENOMQ32MH5
Homologs : HomoloGeneFAM214A
Homology/Alignments : Family Browser (UCSC)FAM214A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM214A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM214A
dbVarFAM214A
ClinVarFAM214A
1000_GenomesFAM214A 
Exome Variant ServerFAM214A
ExAC (Exome Aggregation Consortium)FAM214A (select the gene name)
Genetic variants : HAPMAP56204
Genomic Variants (DGV)FAM214A [DGVbeta]
DECIPHER (Syndromes)15:52873518-52944247  ENSG00000047346
CONAN: Copy Number AnalysisFAM214A 
Mutations
ICGC Data PortalFAM214A 
TCGA Data PortalFAM214A 
Broad Tumor PortalFAM214A
OASIS PortalFAM214A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM214A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM214A
DgiDB (Drug Gene Interaction Database)FAM214A
DoCM (Curated mutations)FAM214A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM214A (select a term)
intoGenFAM214A
Cancer3DFAM214A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM214A
Genetic Testing Registry FAM214A
NextProtQ32MH5 [Medical]
TSGene56204
GENETestsFAM214A
Huge Navigator FAM214A [HugePedia]
snp3D : Map Gene to Disease56204
BioCentury BCIQFAM214A
ClinGenFAM214A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56204
Chemical/Pharm GKB GenePA142671609
Clinical trialFAM214A
Miscellaneous
canSAR (ICR)FAM214A (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM214A
EVEXFAM214A
GoPubMedFAM214A
iHOPFAM214A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:55 CET 2017

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