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FAM221B (family with sequence similarity 221 member B)

Identity

Alias_namesC9orf128
chromosome 9 open reading frame 128
family with sequence similarity 221, member B
Other alias
HGNC (Hugo) FAM221B
LocusID (NCBI) 392307
Atlas_Id 63153
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 35817017 and ends at 35828747 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM221B   30762
Cards
Entrez_Gene (NCBI)FAM221B  392307  family with sequence similarity 221 member B
AliasesC9orf128
GeneCards (Weizmann)FAM221B
Ensembl hg19 (Hinxton)ENSG00000204930 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204930 [Gene_View]  chr9:35817017-35828747 [Contig_View]  FAM221B [Vega]
ICGC DataPortalENSG00000204930
TCGA cBioPortalFAM221B
AceView (NCBI)FAM221B
Genatlas (Paris)FAM221B
WikiGenes392307
SOURCE (Princeton)FAM221B
Genetics Home Reference (NIH)FAM221B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM221B  -     chr9:35817017-35828747 -  9p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM221B  -     9p13.3   [Description]    (hg19-Feb_2009)
EnsemblFAM221B - 9p13.3 [CytoView hg19]  FAM221B - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIFAM221B [Mapview hg19]  FAM221B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC144503 BC146808 BX648702
RefSeq transcript (Entrez)NM_001012446
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM221B
Cluster EST : UnigeneHs.128075 [ NCBI ]
CGAP (NCI)Hs.128075
Alternative Splicing GalleryENSG00000204930
Gene ExpressionFAM221B [ NCBI-GEO ]   FAM221B [ EBI - ARRAY_EXPRESS ]   FAM221B [ SEEK ]   FAM221B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM221B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)392307
GTEX Portal (Tissue expression)FAM221B
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6H8Z2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6H8Z2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6H8Z2
Splice isoforms : SwissVarA6H8Z2
PhosPhoSitePlusA6H8Z2
Domains : Interpro (EBI)Fam221a/b   
Domain families : Pfam (Sanger)FAM221 (PF14753)   
Domain families : Pfam (NCBI)pfam14753   
Conserved Domain (NCBI)FAM221B
DMDM Disease mutations392307
Blocks (Seattle)FAM221B
SuperfamilyA6H8Z2
Human Protein AtlasENSG00000204930
Peptide AtlasA6H8Z2
HPRD16675
IPIIPI00514992   IPI00874078   IPI00923599   IPI00946048   IPI00946897   
Protein Interaction databases
DIP (DOE-UCLA)A6H8Z2
IntAct (EBI)A6H8Z2
FunCoupENSG00000204930
BioGRIDFAM221B
STRING (EMBL)FAM221B
ZODIACFAM221B
Ontologies - Pathways
QuickGOA6H8Z2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM221B
Atlas of Cancer Signalling NetworkFAM221B
Wikipedia pathwaysFAM221B
Orthology - Evolution
OrthoDB392307
GeneTree (enSembl)ENSG00000204930
Phylogenetic Trees/Animal Genes : TreeFamFAM221B
HOVERGENA6H8Z2
HOGENOMA6H8Z2
Homologs : HomoloGeneFAM221B
Homology/Alignments : Family Browser (UCSC)FAM221B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM221B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM221B
dbVarFAM221B
ClinVarFAM221B
1000_GenomesFAM221B 
Exome Variant ServerFAM221B
ExAC (Exome Aggregation Consortium)FAM221B (select the gene name)
Genetic variants : HAPMAP392307
Genomic Variants (DGV)FAM221B [DGVbeta]
DECIPHERFAM221B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM221B 
Mutations
ICGC Data PortalFAM221B 
TCGA Data PortalFAM221B 
Broad Tumor PortalFAM221B
OASIS PortalFAM221B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM221B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM221B
BioMutasearch FAM221B
DgiDB (Drug Gene Interaction Database)FAM221B
DoCM (Curated mutations)FAM221B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM221B (select a term)
intoGenFAM221B
Cancer3DFAM221B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM221B
Genetic Testing Registry FAM221B
NextProtA6H8Z2 [Medical]
TSGene392307
GENETestsFAM221B
Target ValidationFAM221B
Huge Navigator FAM221B [HugePedia]
snp3D : Map Gene to Disease392307
BioCentury BCIQFAM221B
ClinGenFAM221B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD392307
Chemical/Pharm GKB GenePA134925958
Clinical trialFAM221B
Miscellaneous
canSAR (ICR)FAM221B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM221B
EVEXFAM221B
GoPubMedFAM221B
iHOPFAM221B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:55 CEST 2017

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