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FAM230A (family with sequence similarity 230 member A)

Identity

Alias_namesfamily with sequence similarity 230, member A
Alias_symbol (synonym)DGCR15
Other alias
HGNC (Hugo) FAM230A
LocusID (NCBI) 653203
Atlas_Id 63171
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 18487127 and ends at 18500594 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CDKN2A (9p21.3) / FAM230A (22q11.21)

Note

Non-annotated gene. Preliminary data z if You!are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM230A   45045
Cards
Entrez_Gene (NCBI)FAM230A  653203  family with sequence similarity 230 member A
AliasesDGCR15
GeneCards (Weizmann)FAM230A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:18487127-18500594 [Contig_View]  FAM230A [Vega]
TCGA cBioPortalFAM230A
AceView (NCBI)FAM230A
Genatlas (Paris)FAM230A
WikiGenes653203
SOURCE (Princeton)FAM230A
Genetics Home Reference (NIH)FAM230A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM230A  -     chr22:18487127-18500594 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM230A  -     22q11.21   [Description]    (hg19-Feb_2009)
EnsemblFAM230A - 22q11.21 [CytoView hg19]  FAM230A - 22q11.21 [CytoView hg38]
Mapping of homologs : NCBIFAM230A [Mapview hg19]  FAM230A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM230A
Gene ExpressionFAM230A [ NCBI-GEO ]   FAM230A [ EBI - ARRAY_EXPRESS ]   FAM230A [ SEEK ]   FAM230A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM230A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)653203
GTEX Portal (Tissue expression)FAM230A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM230A
DMDM Disease mutations653203
Blocks (Seattle)FAM230A
Protein Interaction databases
BioGRIDFAM230A
STRING (EMBL)FAM230A
ZODIACFAM230A
Ontologies - Pathways
Huge Navigator FAM230A [HugePedia]
snp3D : Map Gene to Disease653203
BioCentury BCIQFAM230A
ClinGenFAM230A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653203
Clinical trialFAM230A
Miscellaneous
canSAR (ICR)FAM230A (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM230A
EVEXFAM230A
GoPubMedFAM230A
iHOPFAM230A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:39 CET 2017

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