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FAM231A (family with sequence similarity 231 member A)

Identity

Alias_namesfamily with sequence similarity 231, member A
Other aliasFAM231C
HGNC (Hugo) FAM231A
LocusID (NCBI) 729574
Atlas_Id 63173
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 16673003 and ends at 16673512 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM231A   49427
Cards
Entrez_Gene (NCBI)FAM231A  729574  family with sequence similarity 231 member A
AliasesFAM231C
GeneCards (Weizmann)FAM231A
Ensembl hg19 (Hinxton)ENSG00000237847 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237847 [Gene_View]  chr1:16673003-16673512 [Contig_View]  FAM231A [Vega]
ICGC DataPortalENSG00000237847
TCGA cBioPortalFAM231A
AceView (NCBI)FAM231A
Genatlas (Paris)FAM231A
WikiGenes729574
SOURCE (Princeton)FAM231A
Genetics Home Reference (NIH)FAM231A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM231A  -     chr1:16673003-16673512 +  1p36.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM231A  -     1p36.13   [Description]    (hg19-Feb_2009)
EnsemblFAM231A - 1p36.13 [CytoView hg19]  FAM231A - 1p36.13 [CytoView hg38]
Mapping of homologs : NCBIFAM231A [Mapview hg19]  FAM231A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001282321
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM231A
Alternative Splicing GalleryENSG00000237847
Gene ExpressionFAM231A [ NCBI-GEO ]   FAM231A [ EBI - ARRAY_EXPRESS ]   FAM231A [ SEEK ]   FAM231A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM231A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729574
GTEX Portal (Tissue expression)FAM231A
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DMU4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DMU4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DMU4
Splice isoforms : SwissVarP0DMU4
PhosPhoSitePlusP0DMU4
Domains : Interpro (EBI)DUF4741   
Domain families : Pfam (Sanger)DUF4741 (PF15897)   
Domain families : Pfam (NCBI)pfam15897   
Conserved Domain (NCBI)FAM231A
DMDM Disease mutations729574
Blocks (Seattle)FAM231A
SuperfamilyP0DMU4
Human Protein AtlasENSG00000237847
Peptide AtlasP0DMU4
IPIIPI00748138   
Protein Interaction databases
DIP (DOE-UCLA)P0DMU4
IntAct (EBI)P0DMU4
FunCoupENSG00000237847
BioGRIDFAM231A
STRING (EMBL)FAM231A
ZODIACFAM231A
Ontologies - Pathways
QuickGOP0DMU4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM231A
Atlas of Cancer Signalling NetworkFAM231A
Wikipedia pathwaysFAM231A
Orthology - Evolution
OrthoDB729574
GeneTree (enSembl)ENSG00000237847
Phylogenetic Trees/Animal Genes : TreeFamFAM231A
HOVERGENP0DMU4
HOGENOMP0DMU4
Homologs : HomoloGeneFAM231A
Homology/Alignments : Family Browser (UCSC)FAM231A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM231A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM231A
dbVarFAM231A
ClinVarFAM231A
1000_GenomesFAM231A 
Exome Variant ServerFAM231A
ExAC (Exome Aggregation Consortium)FAM231A (select the gene name)
Genetic variants : HAPMAP729574
Genomic Variants (DGV)FAM231A [DGVbeta]
DECIPHERFAM231A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM231A 
Mutations
ICGC Data PortalFAM231A 
TCGA Data PortalFAM231A 
Broad Tumor PortalFAM231A
OASIS PortalFAM231A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM231A
BioMutasearch FAM231A
DgiDB (Drug Gene Interaction Database)FAM231A
DoCM (Curated mutations)FAM231A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM231A (select a term)
intoGenFAM231A
Cancer3DFAM231A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM231A
Genetic Testing Registry FAM231A
NextProtP0DMU4 [Medical]
TSGene729574
GENETestsFAM231A
Target ValidationFAM231A
Huge Navigator FAM231A [HugePedia]
snp3D : Map Gene to Disease729574
BioCentury BCIQFAM231A
ClinGenFAM231A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729574
Chemical/Pharm GKB GenePA166123685
Clinical trialFAM231A
Miscellaneous
canSAR (ICR)FAM231A (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM231A
EVEXFAM231A
GoPubMedFAM231A
iHOPFAM231A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:48:24 CEST 2017

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