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FAM231B (family with sequence similarity 231 member B)

Identity

Alias_namesfamily with sequence similarity 231, member B
Other alias-
HGNC (Hugo) FAM231B
LocusID (NCBI) 100133301
Atlas_Id 77761
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 16538724 and ends at 16540035 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM231B   49506
Cards
Entrez_Gene (NCBI)FAM231B  100133301  family with sequence similarity 231 member B
Aliases
GeneCards (Weizmann)FAM231B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:16538724-16540035 [Contig_View]  FAM231B [Vega]
TCGA cBioPortalFAM231B
AceView (NCBI)FAM231B
Genatlas (Paris)FAM231B
WikiGenes100133301
SOURCE (Princeton)FAM231B
Genetics Home Reference (NIH)FAM231B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM231B  -     chr1:16538724-16540035 +  1p36.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM231B  -     1p36.13   [Description]    (hg19-Feb_2009)
EnsemblFAM231B - 1p36.13 [CytoView hg19]  FAM231B - 1p36.13 [CytoView hg38]
Mapping of homologs : NCBIFAM231B [Mapview hg19]  FAM231B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001310155
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM231B
Gene ExpressionFAM231B [ NCBI-GEO ]   FAM231B [ EBI - ARRAY_EXPRESS ]   FAM231B [ SEEK ]   FAM231B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM231B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100133301
GTEX Portal (Tissue expression)FAM231B
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NCW3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NCW3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NCW3
Splice isoforms : SwissVarA6NCW3
PhosPhoSitePlusA6NCW3
Domains : Interpro (EBI)DUF4741   
Domain families : Pfam (Sanger)DUF4741 (PF15897)   
Domain families : Pfam (NCBI)pfam15897   
Conserved Domain (NCBI)FAM231B
DMDM Disease mutations100133301
Blocks (Seattle)FAM231B
SuperfamilyA6NCW3
Peptide AtlasA6NCW3
IPIIPI00743430   
Protein Interaction databases
DIP (DOE-UCLA)A6NCW3
IntAct (EBI)A6NCW3
BioGRIDFAM231B
STRING (EMBL)FAM231B
ZODIACFAM231B
Ontologies - Pathways
QuickGOA6NCW3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM231B
Atlas of Cancer Signalling NetworkFAM231B
Wikipedia pathwaysFAM231B
Orthology - Evolution
OrthoDB100133301
Phylogenetic Trees/Animal Genes : TreeFamFAM231B
HOVERGENA6NCW3
HOGENOMA6NCW3
Homologs : HomoloGeneFAM231B
Homology/Alignments : Family Browser (UCSC)FAM231B
Gene fusions - Rearrangements
Tumor Fusion PortalFAM231B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM231B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM231B
dbVarFAM231B
ClinVarFAM231B
1000_GenomesFAM231B 
Exome Variant ServerFAM231B
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP100133301
Genomic Variants (DGV)FAM231B [DGVbeta]
DECIPHERFAM231B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM231B 
Mutations
ICGC Data PortalFAM231B 
TCGA Data PortalFAM231B 
Broad Tumor PortalFAM231B
OASIS PortalFAM231B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM231B
BioMutasearch FAM231B
DgiDB (Drug Gene Interaction Database)FAM231B
DoCM (Curated mutations)FAM231B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM231B (select a term)
intoGenFAM231B
Cancer3DFAM231B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM231B
MedgenFAM231B
Genetic Testing Registry FAM231B
NextProtA6NCW3 [Medical]
TSGene100133301
GENETestsFAM231B
Target ValidationFAM231B
Huge Navigator FAM231B [HugePedia]
snp3D : Map Gene to Disease100133301
BioCentury BCIQFAM231B
ClinGenFAM231B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100133301
Chemical/Pharm GKB GenePA166123686
Clinical trialFAM231B
Miscellaneous
canSAR (ICR)FAM231B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM231B
EVEXFAM231B
GoPubMedFAM231B
iHOPFAM231B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:28:59 CET 2017

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