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FAM231D (family with sequence similarity 231 member D)

Identity

Alias_namesfamily with sequence similarity 231, member D
Other alias-
HGNC (Hugo) FAM231D
LocusID (NCBI) 644634
Atlas_Id 63174
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 145164141 and ends at 145167607 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM231D   49509
Cards
Entrez_Gene (NCBI)FAM231D  644634  family with sequence similarity 231 member D
Aliases
GeneCards (Weizmann)FAM231D
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:145164141-145167607 [Contig_View]  FAM231D [Vega]
TCGA cBioPortalFAM231D
AceView (NCBI)FAM231D
Genatlas (Paris)FAM231D
WikiGenes644634
SOURCE (Princeton)FAM231D
Genetics Home Reference (NIH)FAM231D
Genomic and cartography
GoldenPath hg38 (UCSC)FAM231D  -     chr1:145164141-145167607 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM231D  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblFAM231D - 1q21.1 [CytoView hg19]  FAM231D - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIFAM231D [Mapview hg19]  FAM231D [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001348147
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM231D
Gene ExpressionFAM231D [ NCBI-GEO ]   FAM231D [ EBI - ARRAY_EXPRESS ]   FAM231D [ SEEK ]   FAM231D [ MEM ]
Gene Expression Viewer (FireBrowse)FAM231D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644634
GTEX Portal (Tissue expression)FAM231D
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZW35   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZW35  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZW35
Splice isoforms : SwissVarQ6ZW35
PhosPhoSitePlusQ6ZW35
Domains : Interpro (EBI)DUF4741   
Domain families : Pfam (Sanger)DUF4741 (PF15897)   
Domain families : Pfam (NCBI)pfam15897   
Conserved Domain (NCBI)FAM231D
DMDM Disease mutations644634
Blocks (Seattle)FAM231D
SuperfamilyQ6ZW35
Peptide AtlasQ6ZW35
IPIIPI00878051   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZW35
IntAct (EBI)Q6ZW35
BioGRIDFAM231D
STRING (EMBL)FAM231D
ZODIACFAM231D
Ontologies - Pathways
QuickGOQ6ZW35
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM231D
Atlas of Cancer Signalling NetworkFAM231D
Wikipedia pathwaysFAM231D
Orthology - Evolution
OrthoDB644634
Phylogenetic Trees/Animal Genes : TreeFamFAM231D
HOVERGENQ6ZW35
HOGENOMQ6ZW35
Homologs : HomoloGeneFAM231D
Homology/Alignments : Family Browser (UCSC)FAM231D
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM231D [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM231D
dbVarFAM231D
ClinVarFAM231D
1000_GenomesFAM231D 
Exome Variant ServerFAM231D
ExAC (Exome Aggregation Consortium)FAM231D (select the gene name)
Genetic variants : HAPMAP644634
Genomic Variants (DGV)FAM231D [DGVbeta]
DECIPHERFAM231D [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM231D 
Mutations
ICGC Data PortalFAM231D 
TCGA Data PortalFAM231D 
Broad Tumor PortalFAM231D
OASIS PortalFAM231D [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM231D
BioMutasearch FAM231D
DgiDB (Drug Gene Interaction Database)FAM231D
DoCM (Curated mutations)FAM231D (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM231D (select a term)
intoGenFAM231D
Cancer3DFAM231D(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM231D
Genetic Testing Registry FAM231D
NextProtQ6ZW35 [Medical]
TSGene644634
GENETestsFAM231D
Target ValidationFAM231D
Huge Navigator FAM231D [HugePedia]
snp3D : Map Gene to Disease644634
BioCentury BCIQFAM231D
ClinGenFAM231D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644634
Chemical/Pharm GKB GenePA166123688
Clinical trialFAM231D
Miscellaneous
canSAR (ICR)FAM231D (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM231D
EVEXFAM231D
GoPubMedFAM231D
iHOPFAM231D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:58 CEST 2017

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