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FAM238B (family with sequence similarity 238 member B (non-protein coding))

Identity

Alias_namesLINC00202-2
long intergenic non-protein coding RNA 202-2
Other alias
HGNC (Hugo) FAM238B
LocusID (NCBI) 731789
Atlas_Id 79811
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 26643108 and ends at 26653454 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM238B   44917
Cards
Entrez_Gene (NCBI)FAM238B  731789  family with sequence similarity 238 member B (non-protein coding)
AliasesLINC00202-2
GeneCards (Weizmann)FAM238B
Ensembl hg19 (Hinxton)ENSG00000231976 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231976 [Gene_View]  chr10:26643108-26653454 [Contig_View]  FAM238B [Vega]
ICGC DataPortalENSG00000231976
TCGA cBioPortalFAM238B
AceView (NCBI)FAM238B
Genatlas (Paris)FAM238B
WikiGenes731789
SOURCE (Princeton)FAM238B
Genetics Home Reference (NIH)FAM238B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM238B  -     chr10:26643108-26653454 +  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM238B  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblFAM238B - 10p12.1 [CytoView hg19]  FAM238B - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBIFAM238B [Mapview hg19]  FAM238B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX105108 CR749234 DB068553
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM238B
Cluster EST : UnigeneHs.178186 [ NCBI ]
CGAP (NCI)Hs.178186
Alternative Splicing GalleryENSG00000231976
Gene ExpressionFAM238B [ NCBI-GEO ]   FAM238B [ EBI - ARRAY_EXPRESS ]   FAM238B [ SEEK ]   FAM238B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM238B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)731789
GTEX Portal (Tissue expression)FAM238B
Human Protein AtlasENSG00000231976-FAM238B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM238B
DMDM Disease mutations731789
Blocks (Seattle)FAM238B
Human Protein Atlas [tissue]ENSG00000231976-FAM238B [tissue]
IPIIPI00470951   IPI00889125   
Protein Interaction databases
FunCoupENSG00000231976
BioGRIDFAM238B
STRING (EMBL)FAM238B
ZODIACFAM238B
Ontologies - Pathways
Huge Navigator FAM238B [HugePedia]
snp3D : Map Gene to Disease731789
BioCentury BCIQFAM238B
ClinGenFAM238B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD731789
Clinical trialFAM238B
Miscellaneous
canSAR (ICR)FAM238B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM238B
EVEXFAM238B
GoPubMedFAM238B
iHOPFAM238B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:21:34 CET 2017

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