Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FAM238C (family with sequence similarity 238 member C (non-protein coding))

Identity

Alias_namesC10orf51
NCRNA00202
LINC00202
LINC00202-1
chromosome 10 open reading frame 51
non-protein coding RNA 202
long intergenic non-protein coding RNA 202
long intergenic non-protein coding RNA 202-1
Alias_symbol (synonym)bB27G4.1
Other alias
HGNC (Hugo) FAM238C
LocusID (NCBI) 387644
Atlas_Id 79376
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 26931206 and ends at 26942001 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM238C   24672
Cards
Entrez_Gene (NCBI)FAM238C  387644  family with sequence similarity 238 member C (non-protein coding)
AliasesC10orf51; LINC00202; LINC00202-1; NCRNA00202; 
bB27G4.1
GeneCards (Weizmann)FAM238C
Ensembl hg19 (Hinxton)ENSG00000283709 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000283709 [Gene_View]  chr10:26931206-26942001 [Contig_View]  FAM238C [Vega]
ICGC DataPortalENSG00000283709
TCGA cBioPortalFAM238C
AceView (NCBI)FAM238C
Genatlas (Paris)FAM238C
WikiGenes387644
SOURCE (Princeton)FAM238C
Genetics Home Reference (NIH)FAM238C
Genomic and cartography
GoldenPath hg38 (UCSC)FAM238C  -     chr10:26931206-26942001 -  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM238C  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblFAM238C - 10p12.1 [CytoView hg19]  FAM238C - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBIFAM238C [Mapview hg19]  FAM238C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097405 AK128027 BC038408
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM238C
Cluster EST : UnigeneHs.529965 [ NCBI ]
CGAP (NCI)Hs.529965
Alternative Splicing GalleryENSG00000283709
Gene ExpressionFAM238C [ NCBI-GEO ]   FAM238C [ EBI - ARRAY_EXPRESS ]   FAM238C [ SEEK ]   FAM238C [ MEM ]
Gene Expression Viewer (FireBrowse)FAM238C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)387644
GTEX Portal (Tissue expression)FAM238C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM238C
DMDM Disease mutations387644
Blocks (Seattle)FAM238C
Human Protein AtlasENSG00000283709
IPIIPI00868898   
Protein Interaction databases
FunCoupENSG00000283709
BioGRIDFAM238C
STRING (EMBL)FAM238C
ZODIACFAM238C
Ontologies - Pathways
Huge Navigator FAM238C [HugePedia]
snp3D : Map Gene to Disease387644
BioCentury BCIQFAM238C
ClinGenFAM238C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387644
Chemical/Pharm GKB GenePA165548956
Clinical trialFAM238C
Miscellaneous
canSAR (ICR)FAM238C (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM238C
EVEXFAM238C
GoPubMedFAM238C
iHOPFAM238C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:00 CEST 2017

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