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FAM239A (zinc finger protein 839 pseudogene)

Identity

Other alias-
HGNC (Hugo) FAM239A
LocusID (NCBI) 101930105
Atlas_Id 80186
Location Xp22.33  [Link to chromosome band Xp22]
Location_base_pair Starts at 3850992 and ends at 3882351 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)FAM239A   53414
Cards
Entrez_Gene (NCBI)FAM239A  101930105  zinc finger protein 839 pseudogene
Aliases
GeneCards (Weizmann)FAM239A
Ensembl hg19 (Hinxton)ENSG00000234449 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234449 [Gene_View]  chrX:3850992-3882351 [Contig_View]  FAM239A [Vega]
ICGC DataPortalENSG00000234449
TCGA cBioPortalFAM239A
AceView (NCBI)FAM239A
Genatlas (Paris)FAM239A
WikiGenes101930105
SOURCE (Princeton)FAM239A
Genetics Home Reference (NIH)FAM239A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM239A  -     chrX:3850992-3882351 -  Xp22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM239A  -     Xp22.33   [Description]    (hg19-Feb_2009)
EnsemblFAM239A - Xp22.33 [CytoView hg19]  FAM239A - Xp22.33 [CytoView hg38]
Mapping of homologs : NCBIFAM239A [Mapview hg19]  FAM239A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097803 DR760352
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM239A
Cluster EST : UnigeneHs.732567 [ NCBI ]
CGAP (NCI)Hs.732567
Alternative Splicing GalleryENSG00000234449
Gene ExpressionFAM239A [ NCBI-GEO ]   FAM239A [ EBI - ARRAY_EXPRESS ]   FAM239A [ SEEK ]   FAM239A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM239A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101930105
GTEX Portal (Tissue expression)FAM239A
Human Protein AtlasENSG00000234449-FAM239A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM239A
DMDM Disease mutations101930105
Blocks (Seattle)FAM239A
Human Protein Atlas [tissue]ENSG00000234449-FAM239A [tissue]
Protein Interaction databases
FunCoupENSG00000234449
BioGRIDFAM239A
STRING (EMBL)FAM239A
ZODIACFAM239A
Ontologies - Pathways
Huge Navigator FAM239A [HugePedia]
snp3D : Map Gene to Disease101930105
BioCentury BCIQFAM239A
ClinGenFAM239A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101930105
Clinical trialFAM239A
Miscellaneous
canSAR (ICR)FAM239A (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM239A
EVEXFAM239A
GoPubMedFAM239A
iHOPFAM239A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:59:32 CET 2017

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