Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM241B (family with sequence similarity 241 member B)

Identity

Alias_namesC10orf35
chromosome 10 open reading frame 35
Other alias
HGNC (Hugo) FAM241B
LocusID (NCBI) 219738
Atlas_Id 79276
Location 10q22.1  [Link to chromosome band 10q22]
Location_base_pair Starts at 69630247 and ends at 69633599 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)FAM241B   23519
Cards
Entrez_Gene (NCBI)FAM241B  219738  family with sequence similarity 241 member B
AliasesC10orf35
GeneCards (Weizmann)FAM241B
Ensembl hg19 (Hinxton)ENSG00000171224 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171224 [Gene_View]  chr10:69630247-69633599 [Contig_View]  FAM241B [Vega]
ICGC DataPortalENSG00000171224
TCGA cBioPortalFAM241B
AceView (NCBI)FAM241B
Genatlas (Paris)FAM241B
WikiGenes219738
SOURCE (Princeton)FAM241B
Genetics Home Reference (NIH)FAM241B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM241B  -     chr10:69630247-69633599 +  10q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM241B  -     10q22.1   [Description]    (hg19-Feb_2009)
EnsemblFAM241B - 10q22.1 [CytoView hg19]  FAM241B - 10q22.1 [CytoView hg38]
Mapping of homologs : NCBIFAM241B [Mapview hg19]  FAM241B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC013587 BF510821 CK903062 DB339258 DB465414
RefSeq transcript (Entrez)NM_145306
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM241B
Cluster EST : UnigeneHs.522992 [ NCBI ]
CGAP (NCI)Hs.522992
Alternative Splicing GalleryENSG00000171224
Gene ExpressionFAM241B [ NCBI-GEO ]   FAM241B [ EBI - ARRAY_EXPRESS ]   FAM241B [ SEEK ]   FAM241B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM241B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219738
GTEX Portal (Tissue expression)FAM241B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96D05   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96D05  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96D05
Splice isoforms : SwissVarQ96D05
PhosPhoSitePlusQ96D05
Domains : Interpro (EBI)DUF4605   
Domain families : Pfam (Sanger)DUF4605 (PF15378)   
Domain families : Pfam (NCBI)pfam15378   
Conserved Domain (NCBI)FAM241B
DMDM Disease mutations219738
Blocks (Seattle)FAM241B
SuperfamilyQ96D05
Human Protein AtlasENSG00000171224
Peptide AtlasQ96D05
IPIIPI00060546   IPI00477442   
Protein Interaction databases
DIP (DOE-UCLA)Q96D05
IntAct (EBI)Q96D05
FunCoupENSG00000171224
BioGRIDFAM241B
STRING (EMBL)FAM241B
ZODIACFAM241B
Ontologies - Pathways
QuickGOQ96D05
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkFAM241B
Atlas of Cancer Signalling NetworkFAM241B
Wikipedia pathwaysFAM241B
Orthology - Evolution
OrthoDB219738
GeneTree (enSembl)ENSG00000171224
Phylogenetic Trees/Animal Genes : TreeFamFAM241B
HOVERGENQ96D05
HOGENOMQ96D05
Homologs : HomoloGeneFAM241B
Homology/Alignments : Family Browser (UCSC)FAM241B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM241B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM241B
dbVarFAM241B
ClinVarFAM241B
1000_GenomesFAM241B 
Exome Variant ServerFAM241B
ExAC (Exome Aggregation Consortium)FAM241B (select the gene name)
Genetic variants : HAPMAP219738
Genomic Variants (DGV)FAM241B [DGVbeta]
DECIPHERFAM241B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM241B 
Mutations
ICGC Data PortalFAM241B 
TCGA Data PortalFAM241B 
Broad Tumor PortalFAM241B
OASIS PortalFAM241B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM241B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM241B
DgiDB (Drug Gene Interaction Database)FAM241B
DoCM (Curated mutations)FAM241B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM241B (select a term)
intoGenFAM241B
Cancer3DFAM241B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM241B
Genetic Testing Registry FAM241B
NextProtQ96D05 [Medical]
TSGene219738
GENETestsFAM241B
Target ValidationFAM241B
Huge Navigator FAM241B [HugePedia]
snp3D : Map Gene to Disease219738
BioCentury BCIQFAM241B
ClinGenFAM241B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219738
Chemical/Pharm GKB GenePA134863788
Clinical trialFAM241B
Miscellaneous
canSAR (ICR)FAM241B (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM241B
EVEXFAM241B
GoPubMedFAM241B
iHOPFAM241B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:08:01 CEST 2017
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.