Atlas of Genetics and Cytogenetics in Oncology and Haematology

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FAM241B (family with sequence similarity 241 member B)

Identity

Alias (NCBI)C10orf35
HGNC (Hugo) FAM241B
HGNC Previous nameC10orf35
HGNC Previous namechromosome 10 open reading frame 35
LocusID (NCBI) 219738
Atlas_Id 79276
Location 10q22.1  [Link to chromosome band 10q22]
Location_base_pair Starts at 69630247 and ends at 69633593 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

 

Nomenclature
HGNC (Hugo)FAM241B   23519
Cards
Entrez_Gene (NCBI)FAM241B    family with sequence similarity 241 member B
AliasesC10orf35
GeneCards (Weizmann)FAM241B
Ensembl hg19 (Hinxton)ENSG00000171224 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171224 [Gene_View]  ENSG00000171224 [Sequence]  chr10:69630247-69633593 [Contig_View]  FAM241B [Vega]
ICGC DataPortalENSG00000171224
TCGA cBioPortalFAM241B
AceView (NCBI)FAM241B
Genatlas (Paris)FAM241B
SOURCE (Princeton)FAM241B
Genetics Home Reference (NIH)FAM241B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM241B  -     chr10:69630247-69633593 +  10q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM241B  -     10q22.1   [Description]    (hg19-Feb_2009)
GoldenPathFAM241B - 10q22.1 [CytoView hg19]  FAM241B - 10q22.1 [CytoView hg38]
ImmunoBaseENSG00000171224
Genome Data Viewer NCBIFAM241B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC013587 BF510821 CK903062 DB339258 DB465414
RefSeq transcript (Entrez)NM_145306
Consensus coding sequences : CCDS (NCBI)FAM241B
Gene ExpressionFAM241B [ NCBI-GEO ]   FAM241B [ EBI - ARRAY_EXPRESS ]   FAM241B [ SEEK ]   FAM241B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM241B [ Firebrowse - Broad ]
GenevisibleExpression of FAM241B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219738
GTEX Portal (Tissue expression)FAM241B
Human Protein AtlasENSG00000171224-FAM241B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96D05   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96D05  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96D05
PhosPhoSitePlusQ96D05
Domains : Interpro (EBI)DUF4605   
Domain families : Pfam (Sanger)DUF4605 (PF15378)   
Domain families : Pfam (NCBI)pfam15378   
Conserved Domain (NCBI)FAM241B
SuperfamilyQ96D05
AlphaFold pdb e-kbQ96D05   
Human Protein Atlas [tissue]ENSG00000171224-FAM241B [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q96D05
IntAct (EBI)Q96D05
BioGRIDFAM241B
STRING (EMBL)FAM241B
ZODIACFAM241B
Ontologies - Pathways
QuickGOQ96D05
Ontology : AmiGOprotein binding  integral component of membrane  intracellular membrane-bounded organelle  
Ontology : EGO-EBIprotein binding  integral component of membrane  intracellular membrane-bounded organelle  
NDEx NetworkFAM241B
Atlas of Cancer Signalling NetworkFAM241B
Wikipedia pathwaysFAM241B
Orthology - Evolution
OrthoDB219738
GeneTree (enSembl)ENSG00000171224
Phylogenetic Trees/Animal Genes : TreeFamFAM241B
Homologs : HomoloGeneFAM241B
Homology/Alignments : Family Browser (UCSC)FAM241B
Gene fusions - Rearrangements
Fusion : QuiverFAM241B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM241B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM241B
dbVarFAM241B
ClinVarFAM241B
MonarchFAM241B
1000_GenomesFAM241B 
Exome Variant ServerFAM241B
GNOMAD BrowserENSG00000171224
Varsome BrowserFAM241B
ACMGFAM241B variants
VarityQ96D05
Genomic Variants (DGV)FAM241B [DGVbeta]
DECIPHERFAM241B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM241B 
Mutations
ICGC Data PortalFAM241B 
TCGA Data PortalFAM241B 
Broad Tumor PortalFAM241B
OASIS PortalFAM241B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM241B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFAM241B
Mutations and Diseases : HGMDFAM241B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFAM241B
DgiDB (Drug Gene Interaction Database)FAM241B
DoCM (Curated mutations)FAM241B
CIViC (Clinical Interpretations of Variants in Cancer)FAM241B
Cancer3DFAM241B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM241B
MedgenFAM241B
Genetic Testing Registry FAM241B
NextProtQ96D05 [Medical]
GENETestsFAM241B
Target ValidationFAM241B
Huge Navigator FAM241B [HugePedia]
ClinGenFAM241B
Clinical trials, drugs, therapy
MyCancerGenomeFAM241B
Protein Interactions : CTDFAM241B
Pharm GKB GenePA134863788
PharosQ96D05
Clinical trialFAM241B
Miscellaneous
canSAR (ICR)FAM241B
HarmonizomeFAM241B
DataMed IndexFAM241B
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFAM241B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:49:59 CEST 2021
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